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. 2012 Jul;22(7):1372–1381. doi: 10.1101/gr.130237.111

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© 2012, Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 3.0 Unported License), as described at http://creativecommons.org/licenses/by-nc/3.0/.

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Figure 8. — Effect of sequence length normalization using random data. The plots show the accumulated triplex potential of single-stranded sequence sets (left), double-stranded sequence sets (middle), and between both sets of sequences (right) either counting the number of triplex features (upper panel) or using a length-adjusted scoring scheme (lower panel) with lines indicating the 90% confidence intervals. All sequence sets are derived from the same 10⁷ nucleotide sequence but partitioned into sets of varying length distribution as indicated by the mean sequence length m ∈ {50, 100, 250} for single-stranded and m ∈ {500, 1000, 2500} for double-stranded sequence sets.