Table 2. Partial oligonucleotides used in this study.
Names | Sequences(5′ to 3′)* | Purposes |
P1 | GCGAATTCAGCTTTATTGAATTTTATGAG | P1/P2:BD-Tt-RpoE1 |
P2 | TCGGATCCTCATCCCTCCAAACATTT | |
P3 | TCCTCGAGTCATCCCTCCAAACATTT | P1/P3: p28Tt-RpoE1 |
P4 | ATGAATTCCGGCGAGTTTCAGCAAGT | P4/P2: pPTt-RopE1-T |
P5 | AGGAATTCGACGAAAAGAGAATAGAG | P5/P6: AD-Tt-TolB |
P6 | TTGGATCCGTATTAAAACCTGCCCTT | |
P7 | CTCTCGAGTATCTTTTTCCATCTGTT | P5/P7: AD-Tt-TolBN |
P8 | AGGAATTCCAAGATAATTTAATAACA | P8/P6: AD-Tt-TolBC |
P9 | ACGAATTCATGGACGAAAAGAGAATAGA | P9/P10: p28Tt-TolB |
P10 | CTCTCGAGGTATTAAAACCTGCCCTT | P8/P10: p28Tt-TolB-C |
P11 | TGGAATTCAGTACTAGCTCTTTGATTTT | P11/P12: AD-Permase |
P12 | TGGGATCCGGCCTGCCTTAGTTGATG | |
P13 | CGGAATTCGTGGAAATAGAGCTTAAAAA | P13/P14: AD-PtsB |
P14 | CGGGATCCTCACTTTATCATCTCCTTTA | P4/P15 for transcription template |
P15 | CTTTGAGTTTGATTTTAC | |
P16 | ACCGGTACACATCGTCAAAGTTTT | For primer extension |
P17 | CCGAAATACTGTGACAGCCTATTACAGAATGAGGA | P17/18: D66A of p28Tt-RpoE1 |
P18 | TCCTCATTCTGTAATAGGCTGTCACAGTATTTCGG | |
P39 | TTTTGTGTAGATTTTTGTCTATAAAGGTGGGAGGAG | P39/40:mutation at −13C of transcription template |
P40 | CTCCTCCCACCTTTATAGACAAAAATCTACACAAAA | |
P41 | TTTGTGTAGATTTTCTTCTATAAAGGTGGGAGGAGT | P41/42:mutation at −12G of transcription template |
P42 | ACTCCTCCCACCTTTATAGAAGAAAATCTACACAAA | |
P43 | TTGTGTAGATTTTCGCCTATAAAGGTGGGAGGAGTC | P43/44:mutation at −11T of transcription template |
P44 | GACTCCTCCCACCTTTATAGGCGAAAATCTACACAA | |
P45 | TGTGTAGATTTTCGTTTATAAAGGTGGGAGGAGTCA | P45/46:mutation at −10C of transcription template |
P46 | TGACTCCTCCCACCTTTATAAACGAAAATCTACACA | |
P47 | GTGTAGATTTTCGTCGATAAAGGTGGGAGGAGTCAA | P47/48:mutation at −9T of transcription template |
P48 | TTGACTCCTCCCACCTTTATCGACGAAAATCTACAC |
Restriction sites are underlined.