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. 2012 Jul 16;7(7):e40828. doi: 10.1371/journal.pone.0040828

Table 1. Primer sequences for CHART-PCR and ChIP assay.

Primer position Sequences (5′ - 3′) CNS
−57/+166 F : GTTTGCCAGCCTTTGGAGC Pro
R : CGAGGCGGATCATGGCTCAC
+976/+1178 F : CTATCGTTAGAGGTGGCAGCTGTATAG CNS 1a
R : CATACAGAGAAAGACAGGGCTGGAAC
+2014/+2405 F : GACATTGACCCACATCTGCATTTCTCAG CNS 1b
R : GCTACCTCTTTCGGGGAACTGTTTTG
+2900/+3068 F : CTGAGGTGGAGGAGCAGGGAGTATC CNS 1c
R : TCTGCTCTTCAAGGAGGGCGAGAATCC
+6397/+6663 F: GCTTCTAAATTGCTACTCTCTTACCTGGCAGC CNS 2a
R: CCAGAGAAATACAAGTGCCCAGTCATTCTTTG
+7628/+7767 F : CTGTTCTTCAGCATCCACCAGGCTTC CNS 2b
R : CATTTGGACCGAGACGCTGGCCTTG
+14049/+14335 F : GTGGGCAAAAGCTGAGGTACCCAGAAGG CNS 3
R : CAGGCGTAGAAAAGCAACCTGATGCCAG
+28700/+29122 F : CTGACCTGACCTGATGATACCCA 3′ UTR
R : GGGCATGCCTTATAGAACCAAGG

Region encompassed by the analyzed CNSs are:

Promoter;−57/+166, CNS 1; +850/+3334, CNS 2; +5755/+9165, CNS 3; +14013/+14613, 3′ UTR; +28700/+29243.