Table 2. Populations of moderate and great concern for Ag85B-TB10.4.
Gene | Population of concern | Allele ofconcern 1 | f* | Allele ofconcern 2 | f* | Allele ofconcern 3 | f* | Phenotype Frequency |
HLA–A | Bangladesh Dhaka Bangalee | A*3301 | 0.170 | A*1101 | 0.156 | 0.106 | ||
China Yunnan Province Bulang | A*1101 | 0.543 | 0.295 | |||||
China Yunnan Province Hani pop 2** | A*1101 | 0.613 | 0.376 | |||||
China Yunnan Province Wa** | A*1101 | 0.584 | A*3303 | 0.160 | 0.554 | |||
India Kerala Hindu Pulaya** | A*1101 | 0.531 | A*0301 | 0.063 | A*3301 | 0.063 | 0.432 | |
India New Delhi | A*1101 | 0.235 | A*0301 | 0.098 | 0.111 | |||
India Tamil Nadu Nadar | A*0301 | 0.205 | A*3101 | 0.189 | 0.155 | |||
Indonesia Java Western | A*1101 | 0.164 | A*3303 | 0.162 | 0.106 | |||
Indonesia Sudanese and Javanese | A*3303 | 0.169 | A*1101 | 0.164 | 0.111 | |||
Pakistan Baloch | A*1101 | 0.222 | A*3303 | 0.127 | 0.122 | |||
Pakistan Brahui | A*1101 | 0.252 | A*3201 | 0.092 | 0.118 | |||
Pakistan Burusho | A*3303 | 0.179 | A*0301 | 0.130 | A*1101 | 0.125 | 0.188 | |
HLA–B | None | None | – | |||||
HLA–C | None | None | – | |||||
HLA-DRB1 | None | None | – |
Allele frequency, from the Allele*frequencies database.
Populations of great concern, defined as populations where 30% or more of the population has an expected phenotype of reduced protection by the vaccine due to having two alleles of concern for a single HLA locus, assuming Hardy-Weinberg equilibrium. Alleles of concern are defined as alleles predicted to bind four or fewer vaccine epitopes.