Table 3.
Comparative nucleotide polymorphisms between pale flax and cultivated flax at 24 sampled genomic regions.
| Primer | S1 | π1 | D1 | D/F1 | Rm1 | S | π | D | D/F | Rm |
|---|---|---|---|---|---|---|---|---|---|---|
| Pale flax | Cultivated flax | |||||||||
| 031B/A | 9 | 0.0102 | 0.454 | 0 | 4 | 0.0040 | 1.126 | 0 | ||
| 049B/A | 3 | 0.0042 | 1.152 | 0 | 14 | 0.0089 | –0.343 | 1 | ||
| 071B/A | 10 | 0.0104 | –0.754 | 4 | 11 | 0.0070 | –0.739 | 4 | ||
| 145B/A | 2 | 0.0030 | 1.642 | 0 | 4 | 0.0049 | 1.967# | ns|# | 1 | |
| 151B/A | 9 | 0.0167 | 1.310 | *|# | 0 | 3 | 0.0042 | 0.959 | 0 | |
| 204B/A | 1 | 0.0027 | 1.303 | 0 | 6 | 0.0056 | –0.344 | 0 | ||
| 221B/A | 11 | 0.0099 | –0.281 | 1 | 10 | 0.0105 | 1.458 | 0 | ||
| 242B/A | 5 | 0.0072 | 0.931 | #|ns | 2 | 4 | 0.0056 | 0.992 | 2 | |
| 246B/A | 4 | 0.0041 | –0.943 | 0 | 3 | 0.0026 | –0.158 | 0 | ||
| 281B/A | 4 | 0.0053 | 0.264 | 0 | 7 | 0.0063 | 0.200 | 0 | ||
| 316B/A | 9 | 0.0251 | 1.219 | 0 | 6 | 0.0078 | 0.627 | 0 | ||
| 360B/A | 8 | 0.0121 | 0.026 | 1 | 7 | 0.0055 | –1.013 | 3 | ||
| 440B/A | 25 | 0.0603 | 1.585 | 0 | 25 | 0.0353 | 0.503 | 0 | ||
| 449B/A | 2 | 0.0043 | 1.642 | 0 | 2 | 0.0008 | –1.102 | 0 | ||
| 469B/A | 6 | 0.0065 | 1.455 | 0 | 15 | 0.0088 | –0.202 | 0 | ||
| 503B/A | 4 | 0.0048 | 0.204 | 1 | 9 | 0.0063 | –0.510 | 3 | ||
| 524B/A | 2 | 0.0027 | 0.222 | 0 | 4 | 0.0034 | –0.041 | 2 | ||
| 550B/A | 7 | 0.0065 | –0.584 | 0 | 5 | 0.0051 | 1.057 | 0 | ||
| 586B/A | 2 | 0.0136 | –0.184 | 0 | 1 | 0.0125 | 0.976 | 0 | ||
| 590B/A | 5 | 0.0116 | 0.981 | #|ns | 0 | 7 | 0.0068 | –0.158 | 1 | |
| 632B/A | 7 | 0.0096 | –0.318 | 0 | 6 | 0.0161 | 2.778** | ns|** | 0 | |
| 676B/A | 13 | 0.0162 | –0.458 | 1 | 8 | 0.0081 | –0.286 | 0 | ||
| 677B/A | 4 | 0.0087 | 0.143 | 1 | 5 | 0.0054 | –0.605 | 2 | ||
| 712B/A | 2 | 0.0032 | 0.120 | 0 | 1 | 0.0023 | 1.643 | 0 | ||
| Total | 154 | 0.0097 | 0.555 | 11 | 167 | 0.0071 | 0.323 | 19 | ||
1
Four polymorphism parameters are S for the number of segregating sites; π, the nucleotide diversity (Tajima 1983); D, selection test by Tajima's D (Tajima 1989); D/F, significant results obtained by Fu and Li's D* and Fu and Li's F* (Fu and Li 1993); Rm, the minimum number of recombination events (Hudson and Kaplan 1985); and significance of test, ns P > 0.05, # P≈ 0.05,*P < 0.05,**P < 0.01.