Table 1.
Expression features of genes located near the insertion site in KMD rice.
| Gene Symbol | Location | Probe Set ID | Fold Change |
|---|---|---|---|
| Os02g0618700 □ | 24614568-24616359 (+) | Os.53063.1.S1_at | Absent calls |
| Os02g0619600 | 24664901-24670392 (-) | Os.18434.1.S1_at | 0.83 |
| Os02g0620100 | 24686644-24690185 (+) | Os.51164.1.S1_at | 1.13 |
| Os02g0620200 | 24690654-24691175 (+) | Os.6623.1.S1_at | 0.99 |
| Os02g0620400 | 24695859-24696717 (+) | Os.37865.1.S1_at | 0.64 |
| Os02g0620500 □ | 24703102-24704598 (+) | OsAffx.12433.1.S1_at | Absent calls |
| insertion site | 24707922-24707956 | RPTR-Os-A00196-1_s_at | 101.87 ★ |
| RPTR-Os-K01193-1_at | 208.51 ★ | ||
| RPTR-Os-A06498-1_at | 334.96 ★ | ||
| Os02g0620600 | 24710277-24712129 (+) | Os.9328.1.S1_at | 0.59 |
| Os02g0620800 □ | 24716249-24717841 (-) | OsAffx.12435.1.S1_at | Absent calls |
| Os02g0621100 ▲ | 24727467-24736677 (+) | Os.53850.1.S1_at | 2.62 |
| Os02g0621300 | 24737440-24743509 (-) | Os.8816.1.S1_at | 1.33 |
| Os02g0621400 □ | 24744227-24744876 (+) | Os.55508.1.S1_at | Absent calls |
| Os02g0621500 | 24747786-24752506 (-) | Os.50341.1.S1_at | 0.87 |
| Os02g0621600 | 24756371-24758680 (-) | Os.17730.1.S1_at | 1.75 |
| Os.17730.1.S1_x_at | 1.72 | ||
| Os02g0621700 | 24761204-24767342 (+) | Os.9758.1.S1_at | 1.02 |
| Os02g0621800 ▼ | 24768844-24774153 (-) | Os.53830.1.S1_at | 0.33 |
| Os02g0622100 | 24786202-24792143 (+) | Os.27664.1.S1_at | 0.89 |
| Os02g0622200 | 24793122-24794433 (-) | Os.16625.1.S1_at | 0.91 |
| Os02g0622300 | 24797477-24798953 (-) | OsAffx.2932.1.S1_s_at | 0.98 |
| Os02g0622400 | 24799323-24802110 (+) | Os.7522.1.S1_at | 1.18 |
| Os02g0622500 | 24802594-24805935 (-) | Os.24611.1.S1_at | 0.99 |
□ Genes expressed in neither KMD nor XS11 rice;▲ Genes up-regulated in KMD rice;▼ Genes down-regulated in KMD rice; ★ Within inserted region of KMD rice, RPTR-Os-A00196-1_s_at, RPTR-Os-K01193-1_at, and RPTR-Os-A06498-1_at, representing beta glucuronidase gene, hygromycin B phosphotransferase gene, and an artificial sequence of nopaline synthase gene, respectively. These showed extremely high expression levels.