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. 2012 Jul 18;7(7):e41382. doi: 10.1371/journal.pone.0041382

Table 1. 2′O-methyl Antisense Oligoribonucleotides.

Name Length Target region Sequence (5′–3′) GC Tm
40 15 D2: 40–26 mUmUmCmAAGUUGCAmCmGmUmU 40 47
55 16 D2: 55–40 mAmAmGmACCAGGCGGmAmGmUmU 56 57
66 16 D2: 66–51 mCmUmAmGACCUGGAAmAmGmAmC 50 46
83 15 D2: 83–68 mUmAmCmAAAGUGUUmAmCmCmC 40 47
104 19 D3: 104–85 mCmGmAmGCGUGGAGCCAAAmCmAmCmA 60 60
118 14 D3: 118–105 mAmCmUmCGCCAGUmGmGmAmU 57 59
135 18 D3: 135–118 mAmCmAmGUGCUGUUACUmAmAmCmA 39 55
154 18 D3: 154–138 mUmCmAmUGCUCCGCUACmGmAmAmG 56 58
164 14 D3: 164–150 mCmCmAmCGGCCGUmCmAmUmG 71 54
176 14 D3: 176–163 mAmAmGmGAGGAGUmUmCmCmC 57 56
183 17 D3: 183–16717nt mUmGmUmUACCAAGGAGmGmAmGmU 47 46
192 15 D3: 192–178 mGmUmGmGGUCCUUGmUmUmAmC 54 46
207 17 D3: 207–191 mGmUmGmGCUUUUGGCCmCmCmGmU 65 64
213 15 D3: 213–199 mGmUmGmGGCGUGGCmUmUmUmU 60 53
226 17 D3: 226–210 mAmUmGACGGGCCCGUmGmUmGmG 71 58
247 16 D3: 247–233 mUmCmGmCCGUGCUGGmGmGmUmU 69 61
265 17 D3: 265–249 mUmGmGmGUUUCGCAGUmAmAmAmG 47 56
282 18 D3: 282–265 mUmCmAmAUGUCACUUUAmAmAmGmU 27 45
300 17 D3: 300–284 mAmGmUmGUGUGGGUACmCmAmGmU 53 62
317 17 D4: 317–301 mAmUmCmCUUAGCCUGUmCmAmCmC 53 62
331 16 D4: 331–317 mGmGmGmUACCUGAAGmGmGmCmA 63 60
349 18 D4: 349–334 mAmGmUmGUCGCGUGUUAmCmCmUmC 56 61
360 18 D4: 361–344 mUmCmAmGAUCCCGAGUGmUmCmGmC 61 63
384 18 D4: 384–367 mUmUmAmUAGAAGCCCCAmGmUmCmC 50 56
397 18 D4: 397–378 mAmAmCmCGAGCGCUUUUmAmUmAmG 44 53
407 16 D4: 407–392 mGmAmAmGCUUUUUAAmAmCmCmG 38 44
419 17 D4: 419–404 mUmAmUmUCAGGCAUAGmAmAmGmC 41 49
432 17 D5: 432–415 mCmCmUmCCGGUCACCUmAmUmUmC 59 59
452 19 D5: 452–433 mUmUmGmUAAAGGAAAGGUmGmCmCmG 47 48
AUG AUG 18 luciferase AUG mCmUmUmCCAUUUUACCAmAmCmAmG 39 49
AUG1 AUG1 19 FMDV AUG1 mCmAmGmUUGUAUUCAUAGmGmGmUmC 42 52
AUG2 18 FMDV AUG2 mGmAmAmUUCCAUUUUUCmCmUmGmC 39 52
SCR 16 Random sequence mUmGmCmAGCUGACAGmUmGmUmA 50 57

2-O′methyl modifications are designated with a letter ¨m̈. GC, content of GC, Tm, melting temperature.