Table 2. Salt bridge interactions between Rbx1 and the acidic loop in the MD Ub-Cdc34-E3 simulations.
Replica 1(%) | Replica 2(%) | Macro-trajectory | |
ARG86Rbx-ASP104Cdc34 | 57.88 | 99.13 | 82.63 |
ARG86Rbx-ASP108Cdc34 | 58.05 | / | 23.22 |
ARG91Rbx -ASP104Cdc34 | 90.7 | 36.5 | 58.19 |
ARG91Rbx-GLU113Cdc34 | 97.83 | 100 | 99.13 |
LYS89Rbx- ASP108Cdc34 | / | 67.16 | 47.30 |