Table 1. Size of universal reference and probeset dynamic-range estimation Affymetrix Mouse 430 2.0 (45101 probesets).
False positive on probeset dynamic-range estimation (mean±s.e.m.) [%] | ||||||||||
Size of common reference (number of microarrray data) | ||||||||||
Exp | 10 | 20 | 40 | 80 | 160 | 320 | 640 | 1280 | 2560 | 5120 |
#1 (n = 10) | 16.38±1.72 | 12.99±1.69 | 4.28±0.98 | 1.88±0.48 | 1.19±0.48 | 0.63±0.27 | 0.25±0.11 | 0.11±0.04 | 0.07±0.03 | 0.04±0.02 |
#2 (n = 10) | 15.10±1.83 | 10.67±2.30 | 3.95±0.91 | 2.26±0.72 | 1.00±0.35 | 0.59±0.25 | 0.27±0.09 | 0.14±0.07 | 0.06±0.02 | 0.03±0.01 |
#3 (n = 10) | 17.68±2.16 | 7.50±1.16 | 4.51±1.02 | 2.52±0.55 | 1.18±0.44 | 0.54±0.19 | 0.21±0.06 | 0.12±0.05 | 0.05±0.02 | 0.04±0.02 |
#4 (n = 10) | 18.37±2.85 | 10.88±1.49 | 5.25±1.11 | 2.59±0.85 | 1.05±0.30 | 0.48±0.15 | 0.32±0.15 | 0.13±0.06 | 0.07±0.03 | 0.03±0.01 |
#5 (n = 10) | 19.15±2.26 | 7.86±1.09 | 4.63±1.10 | 2.19±0.54 | 1.27±0.56 | 0.53±0.17 | 0.25±0.09 | 0.13±0.06 | 0.05±0.02 | 0.03±0.01 |
Ave | 17.34±0.72 | 9.98±1.02 | 4.52±0.22 | 2.29±0.13 | 1.14±0.05 | 0.55±0.03 | 0.26±0.02 | 0.13±0.00 | 0.06±0.00 | 0.03±0.00 |