Table 4. Microarray gene expression profilings tageting HSC based on relative comparison.
Year | Group | Platform | HSC | Compared to | # of probes | # of genes | Ref |
2002 | Hood | House made | Rhlow KLS | Rhhigh KLS | 5000 | [21] | |
2002 | Lemischka | Affymetrix MU-U74-2 A∼C | Rhlow KLS | Variou type of cells | 36000 | 6000+18000 EST | [22] |
2003 | Akashi | Affymetrix MU-U74-2 A∼C | Thy1.1low Rhlow KLS | MPP, CMP, CLP | 36000 | 6000+18000 EST | [23] |
2003 | Weissman | Clontech Atlas Mouse cDNA array | Thy1.1low KLS | CMP, CLP, GMP, MEP, ProT, ProB | 1200 | [24] | |
2005 | Weissman | Stanford Microarray Facility 42 kmouse cDNA array | Thy1.1low Flk2− KLS | Thy1.1low Flk2+ KLS, Thy1.1−Flk2+ KLS | 42000 | [25] | |
2005 | Weissman | Affymetrix Mouse 430 2.0 | CD34− Flk2− KLS (young) | CD34− Flk2− KLS (old) | 45000 | 34000 | [26] |
2006 | Goodell | Affymetrix Mouse U74A | SP Sca1+ Gr1− | CD8+ T cell | 45000 | 34000 | [27] |
2007 | Goodell | Affymetrix Mouse 430 2.0 | SP KLS | Erythrocyte, Granulocyte,Native T cell, Activated T cell,Activated B cell, Monocyte,NK cell | 45000 | 34000 | [28] |
KLS: c-Kit+ Lin− Sca-1+; MPP: multipotent progenitor; CMP: common myeloid progenitor; CLP: common lymphoid progenitor; GMP: granulocyte/macrophage progenitor; MEP: megakaryocyte/erythrocyte progenitor; Pro T: progenitor T cell, Pro B: progenitor B cell.