Table 2.
Scient. abbrev. | Prev.used abbreviatio | Papillomavirus name | Host scientific name | Host common name | Phylogeny | NCBI # | Reference (* direct submission) |
---|---|---|---|---|---|---|---|
AaPV1 | EEPV | Alces alces Papillomavirus 1 | Alces Alces | European elk | delta-1 | M15953 | Ahola et al., 1986 |
BPV1 | BPV1 | Bos taurus Papillomavirus 1 | Bos taurus | domestic cow | delta-4 | X02346 | Chen et al., 1982 |
BPV2 | BPV2 | Bos taurus Papillomavirus 2 | Bos taurus | domestic cow | delta-4 | M20219 | Groff et al., 1986 * |
BPV3 | BPV3 | Bos taurus Papillomavirus 3 | Bos taurus | domestic cow | xi | AF486184 | Terai et al., 2002 |
BPV4 | BPV4 | Bos taurus Papillomavirus 4 | Bos taurus | domestic cow | xi | X05817 | Patel et al., 1987 |
BPV5 | BPV5 | Bos taurus Papillomavirus 5 | Bos taurus | domestic cow | epsilon | AF457465 | Pecenkova et al., 1997 |
BPV6 | BPV6 | Bos taurus Papillomavirus 6 | Bos taurus | domestic cow | xi | AJ620208 | Coggins et al., 1985 |
BPV8 | BPV8 | Bos taurus Papillomavirus 8 | Bos taurus | domestic cow | epsilon | DQ098913 | Tomita et al., 2007 |
BPV9 | BPV9 | Bos taurus Papillomavirus 9 | Bos taurus | domestic cow | xi | AB331650 | Hatama et al., 2008 |
BPV10 | BPV10, AA5 | Bos taurus Papillomavirus 10 | Bos taurus | domestic cow | xi | AB331651 | Hatama et al., 2008 |
CcaPV1 | RdPV1, CcPV1 | Capreolus capreolus Papillomavirus 1 | Capreolus capreolus | Western Roe deer | delta-5 | EF680235 | Erdelyi et al., 2008 |
CcPV1 | CcPV1 | Caretta caretta Papillomavirus 1 | Caretta caretta | Loggerhead turtle | dyozeta | EU493092 | Herbst et al., 2009 |
CgPV1 | CgPV1 | Colobus guereza Papillomavirus 1 | Colobus guereza | Colobus monkey | alpha-14 | GU014532 | Kloster et al., 1988, Reszka et al., 1991 * |
CgPV2 | CgPV2 | Colobus guereza Papillomavirus 2 | Colobus guereza | Colobus monkey | beta-1 | GU014533 | Kloster et al., 1988 * |
ChPV1 | ChPV1 | Capra hircus Papillomavirus 1 | Capra hircus | domestic goat | phi | DQ091200 | Van Doorslaer et al., 2006 |
CmPV1 | CmPV1 | Chelonia mydas Papillomavirus 1 | Chelonia mydas | green seaturtle | dyozeta | EU493091 | Herbst et al., 2009 |
CPV1 | CoPV, CPV1 | Canis familiaris oral Papillomavirus | Canis familiaris | domestic dog | lambda-2 | D55633 | Isegawa et al., 1995 |
CPV2 | CPV2, CfPV2 | Canis familiaris Papillomavirus 2 | Canis familiaris | domestic dog | tau | AY722648 | Yuan et al., 2007 |
CPV3 | CPV3 | Canis familiaris Papillomavirus 3 | Canis familiaris | domestic dog | chi-1 | DQ295066 | Tobler et al., 2006 |
CPV4 | CPV4 | Canis familiaris Papillomavirus 4 | Canis familiaris | domestic dog | chi-2 | EF584537 | Tobler et al., 2007 * |
CPV5 | CPV5 | Canis familiaris Papillomavirus 5 | Canis familiaris | domestic dog | chi-1 | FJ492742 | Lange et al., 2009 |
CPV6 | CPV6 | Canis familiaris Papillomavirus 6 | Canis familiaris | domestic dog | lambda-3 | FJ492743 | Lange et al., 2009 |
CPV7 | CPV7 | Canis familiaris Papillomavirus 7 | Canis familiaris | domestic dog | tau | FJ492744 | Lange et al., 2009 |
EcPV1 | EcPV1 | Equus caballus Papillomavirus 1 | Equus ferus caballus | domestic horse | zeta | AF498323 | Ghim et al., 2004 |
EcPV2 | EqPV2 | Equus caballus Papillomavirus 2 | Equus ferus caballus | domestic horse | dyoiota | EU503122 | Scase et al., 2009 * |
EdPV1 | EdPV1 | Erethizon dorsatum Papillomavirus 1 | Erethizon dorsatum | North American porcupine | sigma | AY684126 | Rector et al., 2005 |
EePV1 | EhPV, HhPV1, EEPV | Erinaceus europaeus Papillomavirus 1 | Erinaceus europaeus | European hedgehog | dyoeta | FJ379293 | Schulz et al., 2009 |
FcPV1 | FcPV | Fringilla coelebs Papillomavirus | Fringilla coelebs | Chaffinch (bird) | eta | AY057109 | Terai et al., 2002 |
FdPV1 | FdPV1 | Felis domesticus Papillomavirus 1 | Felis domesticus | domestic cat | lambda-1 | AF480454 | Tachezy et al., 2002 |
FdPV2 | FdPV2 | Felis domesticus Papillomavirus 2 | Felis domesticus | domestic cat | dyotheta | EU796884 | Lange et al., 2009 |
FlPV1 | FLPV | Francolinus leucoscepus Papillomavirus 1 | Francolinus leucoscepus | Yellownecked Francolin (bird) | dyoepsilon | EU188799 | Van Doorslaer et al., 2009 |
LrPV1 | LrPV1 | Lynx rufus Papillomavirus 1 | Lynx rufus | Bobcat | lambda-1 | AY904722 | Rector et al., 2007 |
MaPV1 | HaOPV | Mesocricetus auratus Papillomavirus 1 | Mesocricetus auratus | Syrian Golden hamster | pi-2 | E15111 | Iwasaki et al., 1998 (patent) |
McPV2 | McPV2 | Mastomys coucha Papillomavirus 2 | Mastomys coucha | Multimammate Mouse | pi-1 | DQ664501 | Nafz et al., 2006 |
MfPV1 | MfPV1 | Macaca fascicularis Papillomavirus 1 | Macaca fascicularis | Cynomolgus macaque | beta-1 | EF028290 | Joh et al., 2009 |
MfPV2 | MfPV2 | Macaca fascicularis Papillomavirus 2 | Macaca fascicularis | Cynomolgus macaque | beta-6 | GU014531 | Chen et al., unpub * |
MfPV3 | MfPV3, RhPV-d | Macaca fascicularis Papillomavirus 3 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558839 | Chen et al., 2009 |
MfPV4 | MfPV4 | Macaca fascicularis Papillomavirus 4 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558841 | Chen et al., 2009 |
MfPV5 | MfPV5, MfPV-a | Macaca fascicularis Papillomavirus 5 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558843 | Chen et al., 2009 |
MfPV6 | MfPV6 | Macaca fascicularis Papillomavirus 6 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558840 | Chen et al., 2009 |
MfPV7 | MfPV7 | Macaca fascicularis Papillomavirus 7 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558838 | Chen et al., 2009 |
MfPV8 | MfPV8, RhPV-a | Macaca fascicularis Papillomavirus 8 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EF558842 | Chen et al., 2009 |
MfPV9 | MfPV9 | Macaca fascicularis Papillomavirus 9 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EU490516 | Chen et al., 2009 |
MfPV10 | MfPV10 | Macaca fascicularis Papillomavirus 10 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | EU490515 | Chen et al., 2009 |
MfPV11 | MfPV11, RhPV-b | Macaca fascicularis Papillomavirus 11 | Macaca fascicularis | Cynomolgus macaque | alpha-12 | GQ227670 | Chen et al., 2009 |
MmiPV1 | MmPV1 | Micromys minutus Papillomavirus 1 | Micromys minutus | Old World harvest mouse | pi-1 | DQ269468 | Van Doorslaer et al., 2007 |
MmPV1 | RhPV-1 | Macaca mulata Papillomavirus 1 | Macacca mulata | Rhesus macaque | alpha-12 | M60184 | Ostrow et al., 1991 |
MnPV1 | MnPV1, MrPV, MmPV | Mastomys natalensis Papillomavirus 1 | Mastomys natalensis | Multimammate Mouse | iota | U01834 | Tan et al., 1994 |
OaPV1 | OvPV1 | Ovis aries Papillomavirus 1 | Ovis aries | domestic sheep | delta-3 | U83594 | Karlis et al. 2000 * |
OaPV2 | OvPV2 | Ovis aries Papillomavirus 2 | Ovis aries | domestic sheep | delta-3 | U83595 | Karlis et al. 2000 * |
OcPV1 | ROPV | Oryctolagus cuniculus Papillomavirus 2 | Oryctolagus cuniculus | New Zealand white rabbit | kappa-1 | AF227240 | Christensen et al., 2000 |
OvPV1 | DPV | Odocoileus virginianus Papillomavirus 1 | Odocoileus virginianus | American White-tailed Deer | delta-2 | M11910 | Groff et al., 1986 |
PcPV1 | PcPV1 | Puma concolor Papillomavirus 1 | Puma concolor | puma | lambda-1 | AY904723 | Rector et al., 2007 |
PePV1 | PePV | Psittacus erithacus Papillomavirus | Psittacus erithacus | grey parrot (bird) | theta | AF420235 | Tachezy et al., 2002 |
PlpPV1 | PlpPV1 | Panthera leo persica Papillomavirus 1 | Panthera leo persica | Asiatic lion | lambda-1 | AY904724 | Rector et al., 2007 |
PlPV1 | PIPV1 | Procyon lotor Papillomavirus 1 | Procyon lotor | raccoon | lambda-4 | AY763115 | Rector et al., 2005 |
PpPV1 | PpPV1, PCPV | Pan paniscus Papillomavirus 1 | Pan paniscus | pygmy chimpanzee | alpha-10 | X62844 | Van Ranst et al., 1992 |
PsPV1 | PsPV | Phocoena spinipinnis Papillomavirus | Phocoena spinipinnis | Burmeister’s porpoise | omikron | AJ238373 | Cassonnet et al., 2007* |
RaPV1 | RaPV1 | Rousettus aegyptiacus Papillomavirus 1 | Rousettus aegyptiacus | Egyptian rousette (fruitbat) | psi | DQ366842 | Rector et al., 2006 |
RnPV1 | RnPV1 | Rattus norvegicus Papillomavirus 1 | Rattus norvegicus | Norweyian rat | pi-1 | GQ180114 | Schulz et al., 2009 |
RtPV1 | RtPV, RPV | Rangifer tarandus Papillomavirus 1 | Rangifer tarandus | Reindeer | delta-1 | AF443292 | Burk et al., 2001 |
SfPV1 | CRPV, SPV | Sylvilagus floridanus Papillomavirus 1 | Sylvilagus floridanus | Cottontail rabbit | kappa-2 | K02708 | Wellstein & Stevens, 1980, Giri et al., 1985 |
SsPV1 | SsPV1 | Sus scrofa Papillomavirus 1 | Sus scrofa | domestic pig | dyodelta | EF395818 | Stevens et al., 2008 |
TmPV1 | TmPV1 | Trichechus manatus latirostris Papillomav latirostris | Trichechus manatus | Caribbean manatee | rho | AY609301 | Rector et al., 2004 |
TtPV1 | TtPV1 | Tursiops truncatus Papillomavirus 1 | Tursiops truncatus | bottlenosed dolphin | upsilon-1 | EU240894 | Rector et al., 2008 |
TtPV2 | TtPV2 | Tursiops truncatus Papillomavirus 2 | Tursiops truncatus | bottlenosed dolphin | upsilon-2 | AY956402 | Rehtanz et al., 2006 |
TtPV3 | TtPV3 | Tursiops truncatus Papillomavirus 3 | Tursiops truncatus | bottlenosed dolphin | upsilon-1 | EU240895 | Rector et al., 2008 |
UmPV1 | UmPV1 | Ursus maritimus Papillomavirus 1 | Ursus maritimus | polar bear | omega | EF536349 | Stevens et al., 2008 |
UuPV1 | UuPV1 | Uncia uncia Papillomavirus 1 | Uncia uncia | snow leopard | lambda-1 | DQ180494 | Rector et al., 2007 |
Footnote: see supplemental table for ICTV animal papillomavirus nomenclature.