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. 2012 Jul 19;8(7):e1002597. doi: 10.1371/journal.pcbi.1002597

Table 3. Inferelator predictions of regulators of twenty Biclusters generated using FABIA.

BICLUSTER∧ NUMBER OF PROBESETS NUMBER OF OBSERVATIONS CLUSTER PROBABLY POSITIVELY REGULATED BY*** CLUSTER PROBABLY NEGATIVELY REGULATED BY***
1 2084 32 TBX3, ELF3 ATF2_with_HSF1
2 2096 30 CEBPG, ATF1 PML, TP63, TBX5, TBX5_with_NFKBIB, PPARD_with_SMAD3
3 1560 31 CEBPG_with_TP63, NME1-NME2, TCF7L2, TIAL1
4 1569 38 NFE2L2_with_CDKN1A, STAT1 TCF7L2
5 2619 35 STAT5B_with_TP63, SMAD3 HTATIP2
6 1705 35 RUNX3 E2F1_and_TCFL2 , HTATIP2
7 1381 38 STAT1, CREBBP E2F1, LOC652346, PML_with_TBX2, TBX5
8 1991 44 STAT5B, NFATC3 TCF7L2, TCF7L2_with_TIAL1
9 1089 33 NLRP3, SMAD3, RUNX3
10 967 47 SIGIRR
11 806 32 RUNX3, RUNX3_with_SMAD3 ATF2, EP300_with_TBX2, TCF7L2
12 566 34 TP63_and_STAT1 CEBPB, TCF7L2
13 567 56 FOXO3, SMAD3_with_ERC1, ELF3 STAT5A
14 493 50 ARHGDIA_with_RUNX3, RUNX3 PML, E2F1
15 754 45 ELF3 CREB1_with_TIAL1
16 356 43 PML_with_HSF1, LOC161527, HSF1, SBNO2
17 510 46 SBNO2, JUN, RUNX3_with_CREB1,JUN_with_TP53, TP63 NFATC4_with_HTATIP2
18 380 61 ELF3_with_BCL10 ATF1
19 347 47 SMAD3 TGFB1_with_GOLGA6L4, STAT5A
20 497 50 HIF1A, STAT1, STAT5B, RELA HSF1_with_TBX5
∧Obtained using FABIA algorithm ****Per Inferelator predictions