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. 2012 Aug;82(2):344–359. doi: 10.1124/mol.112.078568

TABLE 1.

The structures of ligands docked to the hydrated model of GluN1/GluN2B

GluN2B-selective negative allosteric modulators that were used in docking studies to better understand the mechanism of action and their interactions within the GluN1/GluN2B interface are shown. The compounds are aligned with the general pharmacophore model (top) to illustrate how they interact with the binding interface. Published IC50 values were obtained from the references in the footnotes; for compound 93-138, the IC50 (0.384 μM) was determined from 20 oocytes as described under Materials and Methods.

Inline graphicInline graphic

Compound Structure IC50 Compound Structure IC50
μM μM
Ifenprodila graphic file with name zmo008126613012b.jpg 0.040 Compound 68b graphic file with name zmo008126613012k.jpg 0.065
Ro-25-6981c graphic file with name zmo008126613012c.jpg 0.009 Compound 49b graphic file with name zmo008126613012l.jpg 0.051
Ro-63-1908d graphic file with name zmo008126613012d.jpg 0.003 Compound 15b graphic file with name zmo008126613012m.jpg 0.028
Traxoprodile graphic file with name zmo008126613012e.jpg 0.0039 Bensonprodilf graphic file with name zmo008126613012n.jpg 0.008
Eliprodilg graphic file with name zmo008126613012f.jpg 1.0 Compound 3ah graphic file with name zmo008126613012o.jpg 0.002
Compound 37ai graphic file with name zmo008126613012g.jpg 0.0097 Compound 3dh graphic file with name zmo008126613012p.jpg 0.003
Compound 29j graphic file with name zmo008126613012h.jpg 0.051 Compound 46bk graphic file with name zmo008126613012q.jpg 0.005
Compound 52b graphic file with name zmo008126613012i.jpg 0.054 Radiprodill graphic file with name zmo008126613012r.jpg 0.003
Compound 93–138 graphic file with name zmo008126613012j.jpg 0.501 Compound 12am graphic file with name zmo008126613012s.jpg 0.018