Table 1.
Comparison of the running time of different flow cytometry clustering algorithms
flowPeaks | Misty mountain | FLOCK | flowMeans | FLAME | flowMerge | |
---|---|---|---|---|---|---|
Concave | 0.13 | 0.59 | 6 | 6.2 | 1434 | 3202 |
Barcode | 2.3 | 24.7 | 14 | 82.3 | 80 952 | 132 446 |
The running time is shown in wall-clock seconds on the same desktop computer except that FLOCK and FLAME were run, respectively, at immport (http://immport.niaid.nih.gov) and gene pattern websites (http:www.broadinstitute.org/cancer/software/genepattern)