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. 2012 Jun 4;28(15):1965–1971. doi: 10.1093/bioinformatics/bts329

Table 1.

Physical properties of the RDNPs

Property General description Technical description
Repositioned variation Change in the nucleosome location Mean location change for the nucleosomal dyads within an RDNP
Occupancy change Change in the number of bound nucleosomes Fold change in the number of reads
Positioning degree change A measure of the change in the delocalization of nucleosomes Difference in the positioning degree between samples
Effective width Effectiveness of the differential nucleosome positioning Width of the RDNP
Candidate driver location Locations that may drive differential nucleosome positioning Location with the most significant P-value within an RDNP