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. 2012 Mar 9;21(5):707–716. doi: 10.1002/pro.2058

Table II.

Data Collection, Phasing, and Refinement Statistics

Dataset Native Selenomethionine derivative
Crystal parameters
Space group P6522 P6522
Cell dimensions a, c (Å) 130.79, 147.74 131.58, 148.60 131.41, 148.31 131.59, 148.61 131.72, 148.57
Data collection
Wavelength (Å) 0.9000 0.9950 0.9793 0.9789 0.9640
Resolution range (Å)a 20–2.5 20–2.7 20–2.7 20–2.7 20–2.7
Total reflections 156019 395194 388809 389697 390047
Unique reflectionsa 26252 (1277) 21282 (1037) 21353 (1055) 21258 (1037) 21387 (1058)
Rmergeab 0.081 (0.487) 0.070 (0.439) 0.078 (0.436) 0.083 (0.417) 0.091 (0.590)
Average I/σ(I)ac 11.6 (4.4) 13.6 (6.2) 13.1 (6.0) 13.5 (6.3) 12.1 (5.7)
Completenessa 0.999 (1.000) 0.999 (1.000) 0.999 (1.000) 0.999 (1.000) 0.999 (1.000)
Redundancya 5.9 (6.0) 18.6 (19.0) 18.2 (17.9) 18.3 (18.8) 18.2 (17.9)
Refinement MAD phasing
Resolution range (Å) 20–2.5 No. of selenium sites 8
R-factor / free R-factorde 0.194/0.230 Mean figure of merit
Atoms in an asymmetric unit acentric 0.564
 Protein 3675 centric 0.343
 Ligand (ADP, P-analog, 2 Mg) 51
 Water 147
Deviations from ideal geometry
 Bonds distances (Å) 0.009
 Angles (°) 1.295
Mean isotropic equivalent B-factors
 Main-chain (Å2) 22.3
 Side-chain (Å2) 23.0
 Ligand (Å2) 22.5
 Water (Å2) 22.7
Ramachandran plotf
 Favored 0.959
 Allowed 0.041
a

Values in parentheses are for highest resolution shells.

b

Rmerge = ΣhklΣi(|Ii (hkl)- <I(hkl)>|)/ ΣhklΣiIi(hkl).

c

Signal-to-noise ratio of intensities.

d

R = Σ(|FoFc|)/ΣFo.

e

Five percent of reflections were randomly chosen for calculation of free R value.

f

Values from Rampage.37