Table 1.
Top 50 genes with enriched expression in R+C+ 5HT neurons (cluster I)
| Affy ID | Fold change | Gene symbol | Gene title |
|---|---|---|---|
| 1430105_at | 19.9 | 1700042O10Rik | RIKEN cDNA 1700042O10 gene |
| 1433434_at, 1433435_at | 18.6, 7.1 | AW551984 | Expressed sequence AW551984 |
| 1460303_at, 1421867_at | 14.8, 5.3 | Nr3c1 | Nuclear receptor subfamily 3, group C, member 1 |
| 1427038_at | 10.9 | Penk1 | Preproenkephalin 1 |
| 1445546_at | 10.8 | AI844685 | Expressed sequence AI844685 |
| 1445247_at | 9.9 | C530044C16Rik | RIKEN cDNA C530044C16 gene |
| 1460578_at | 9.6 | Fgd5 | FYVE, RhoGEF, and PH domain-containing 5 |
| 1421498_a_at | 9.4 | 2010204K13Rik | RIKEN cDNA 2010204K13 gene |
| 1433578_at | 8.9 | EG545758 | Predicted gene, EG545758/solute carrier family 10 (sodium/bile acid cotransporter family), member 4 |
| 1436004_at | 8.7 | Usp27x | Ubiquitin-specific peptidase 27, X chromosome |
| 1456108_x_at, 1418360_at, 1418360_at | 8.5, 4.7, 4.2 | Rnf112 | Ring finger protein 112 |
| 1440891_at, 1435722_at | 8.2, 6.2 | Gria4 | Glutamate receptor, ionotropic, AMPA4 (α4) |
| 1458230_at | 7.1 | — | — |
| 1450344_a_at | 7.0 | Ptger3 | Prostaglandin E receptor 3 (subtype EP3) |
| 1441330_at | 6.9 | Crb1 | Crumbs homolog 1 (Drosophila) |
| 1436772_at | 6.7 | — | — |
| 1424842_a_at | 6.6 | Arhgap24 | Rho GTPase-activating protein 24 |
| 1455416_at | 6.1 | C130021I20Rik | Riken cDNA C130021I20 gene |
| 1420955_at | 5.9 | Vsnl1 | Visinin-like 1 |
| 1452981_at, 1449563_at | 5.8, 5.1 | Cntn1 | Contactin 1 |
| 1441729_at | 5.6 | — | — |
| 1456712_at, 1455260_at | 5.5, 4.4 | Lcorl | Ligand-dependent nuclear receptor corepressor-like |
| 1447707_s_at, 1452202_at | 5.4, 3.9 | Pde2a | Phosphodiesterase 2A, cGMP-stimulated |
| 1460097_at | 5.3 | — | — |
| 1428434_at | 5.2 | Zcchc12 | Zinc finger, CCHC domain-containing 12 |
| 1447669_s_at | 5.2 | Gng4 | Guanine nucleotide-binding protein (G-protein), γ4 |
| 1435939_s_at | 5.1 | Hepacam2 | HEPACAM family member 2 |
| 1417441_at | 5.1 | Dnajc12 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| 1447946_at | 4.9 | Adam23 | A disintegrin and metallopeptidase domain 23 |
| 1441625_at | 4.9 | Rimbp2 | RIMS-binding protein 2 |
| 1428599_at | 4.8 | Kndc1 | Kinase noncatalytic C-lobe domain (KIND)-containing 1 |
| 1456783_at | 4.7 | Zdbf2 | Zinc finger, DBF-type-containing 2 |
| 1434800_at | 4.7 | Sv2b | Synaptic vesicle glycoprotein 2 b |
| 1441055_at | 4.4 | Akap2/Palm2 | A kinase (PRKA) anchor protein 2/paralemmin 2/Palm2-Akap2 protein |
| 1419200_at | 4.3 | Fxyd7 | FXYD domain-containing ion transport regulator 7 |
| 1433884_at | 4.3 | Syt1 | Synaptotagmin I |
| 1416762_at, 1456642_x_at | 4.3, 4.0 | S100a10 | S100 calcium-binding protein A10 (calpactin) |
| 1433643_at | 4.2 | Cacna2d1 | Calcium channel, voltage-dependent, α2/δ subunit 1 |
| 1429702_at | 4.1 | 2900072G11Rik | RIKEN cDNA 2900072G11 gene |
| 1426622_a_at | 4.0 | Qpct | Glutaminyl-peptide cyclotransferase (glutaminyl cyclase) |
| 1442077_at | 4.0 | 2310076G05Rik | RIKEN cDNA 2310076G05 gene |
| 1433582_at | 3.9 | 1190002N15Rik | RIKEN cDNA 1190002N15 gene/hypothetical protein LOC100044725 |
| 1451046_at | 3.9 | LOC100047651 | Similar to FOG/zinc finger protein, multitype 1 |
| 1417398_at, 1448689_at | 3.8, 3.6 | Rras2 | Related RAS viral (r-ras) oncogene homolog 2 |
| 1452114_s_at | 3.7 | Igfbp5 | Insulin-like growth factor-binding protein 5 |
| 1433919_at | 3.7 | Asb4 | Ankyrin repeat and SOCS box-containing 4 |
| 1452936_at | 3.7 | Crtac1 | Cartilage acidic protein 1 |
| 1428221_at | 3.7 | Klhdc8b | Kelch domain-containing 8B |
| 1417411_at | 3.6 | Nap1l5 | Nucleosome assembly protein 1-like 5 |
| 1447933_at | 3.5 | Kif26a | Kinesin family member 26A |