Table 1.
Primer | Sequence (5’ – 3’) | Hybridization site |
---|---|---|
AscI_GI_F |
TAGGCGCGCCATGGTCCGTCCTGTAGAA |
5’ terminus of GUS-intron |
GI_NotI_R |
TTGCGGCCGCAGAGGATCCTCATTGTTT |
3’ terminus of GUS-intron |
Rep_F |
GCCTGAGTTTTGTGGTTGG |
internal to PVX RdRp |
GI_R |
GGATAGTCTGCCAGTTCAGTTCG |
internal to GUS-intron |
GI_XhoI_R |
CCTACTCGAGCCTCATTGTTTGCCTCCC |
3’ terminus of GUS-intron |
PEBVsgPR_F |
AACTCGGTTTGCTGACCTAC |
PEBV subgenomic promoter |
TRV3UTR_R |
ACCTAAAACTTCAGACACGG |
3’ UTR of TRV RNA-2 |
AgeI-GI_F |
TATAACCGGTCATGGTCCGTCCTGTAGAAACC |
5’ terminus of GUS-intron |
pEAQ_F |
AACGTTGTCAGATCGTGCTTCGGCACC |
5’ UTR of pEAQ-HT |
pEAQ_R | CTCCTGTTTAGCAGGTCGTCCCTTCAG | 3’ UTR of pEAQ-HT |
Sequences added with 5’ extensions are shown in bold with restriction enzyme recognition sites underlined. Initiation codons are italicized. UTR, untranslated region; PEBV, Pea early browning virus; RdRp, RNA-dependent RNA polymerase.