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. 2012 Jun 7;43(1):50. doi: 10.1186/1297-9716-43-50

Table 4.

Genetic variability of different regions within the CSFV genome.

 
  
  
 number of variable positions
analyzed region
 all genotypes(n = 85)
 genotype 2(n = 48)
 subgenotype 2.3(n = 28)
name position1 size1 [nt] abs. [n] rel. [%] abs. [n] rel. [%] abs. [n] rel. [%]
5´NTR frag.
 200-349
 150
 39
 26
 28
 19
 14
 9
Npro
 374-877
 504
 254
 50
 188
 37
 101
 20
C
 878-1174
 297
 139
 47
 107
 36
 52
 18
Erns
 1175-1855
 681
 309
 45
 229
 34
 99
 15
E1
 1856-2440
 585
 261
 45
 179
 31
 82
 14
E2
 2441-3361
 1119
 543
 49
 424
 38
 221
 20
E2 frag.
 2518-2707
 190
 95
 50
 78
 41
 41
 21
5´NTR - E2 200-3707 3508 1621 46 1202 34 589 17

1 Numbers refer to the sequence of CSFV strain Alfort187 [GenBank: X87939].