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. 2012 May 20;13:40. doi: 10.1186/1471-2156-13-40

Table 1.

Summary of the SNP and haplotypes associated with carcass weight

Category1) SNP or Haplotype Chr Position (Btau4.0) Allele substitution effect (kg) p-value Q allele q allele Q frequency
A
Hapmap26308-BTC-057761
6
37,963,147
35.5
9.65E-12
A
G
0.199
 
BTA-52694-no-rs
8
89,397,242
26.0
4.24E-09
A
G
0.138
 
Hapmap46986-BTA-34282
14
23,519,449
27.2
1.03E-12
A
G
0.759
B
NCAPG c.1326T > G
6
38,164,357
35.3
5.28E-12
G
T
0.200
 
Hapmap40466-BTA-82123 and BTA-52694-no-rs
8
-
35.0
8.13E-13
C-A
Others
0.115
  FJX_PLAPROTRI 14 23,264,810 28.4 2.84E-14 (CCG)11 (CCG)9 0.754

1)A, SNP on the BovineSNP50 BeadChip that showed the strongest association on a chromosome.

1)B, Critical SNP or a haplotype in the associated regions.