Table 2. Genome characteristics.
Organism | #Contigs >200 bp | Assembled bp | Coverage | CDSs | % w/Function | RNAs | % Coding | %GC | Isolated From |
Haloarcula californiae | 168 | 4,420,514 | 21 | 4627 | 62.5 | 69 | 87.00 | 60.82 | Baja, Mexico |
Haloarcula sinaiiensis | 140/10* | 4,524,388 | 19/45* | 4538 | 63.1 | 55 | 84.62 | 60.77 | Red Sea, Israel |
Haloarcula vallismortis | 88 | 3,930,055 | 24 | 4084 | 65.2 | 84 | 88.22 | 61.79 | Death Valley, California, USA |
Haloarcula marismortui (GenBank) | 9 | 4,274,642 | N/A | 4325 | 51.8 | 62 | 85.83 | 61.12 | Dead Sea |
Haloferax denitrificans | 21 | 3,848,468 | 25 | 3809 | 70.5 | 58 | 85.80 | 66.27 | San Francisco Bay, California, USA |
Haloferax mediterranei | 141/5* | 3,905,749 | 26/53* | 3942 | 65.7 | 62 | 85.83 | 60.27 | Alicante, Spain |
Haloferax mucosum | 26 | 3,371,699 | 29 | 3455 | 66.0 | 61 | 86.38 | 61.84 | Shark Bay, Australia |
Haloferax sulfurifontis | 29 | 3,816,558 | 27 | 3856 | 67.6 | 59 | 86.56 | 66.30 | Zodletone spring, SW Oklahoma, USA |
Haloferax volcanii (resequenced) | 145 | 3,920,004 | 25 | N/A | N/A | N/A | N/A | N/A | Shore mud, Dead Sea |
Haloferax volcanii (GenBank) | 5 | 4,012,900 | N/A | 4015 | 63.3 | 49 | 85.56 | 65.48 | Shore mud, Dead Sea |
Note: *Indicates results of mate-pair sequencing.
Note: The Haloferax volcanii control was not submitted to IMG for annotation and so some features are N/A.