Table 1. Comparison of ETC transcriptome data to general and plant-specific databases.
No. contigs | database | hits BlastX (<1E-10) | hits (%) |
42,086 | UniProtKB/Swiss-Prot | 11,477 | 27.3 |
“ | UniProtKB/TrEMBL | 21,085 | 50.1 |
“ | NCBI nr_pep | 21,416 | 50.9 |
“ | TAIR9_cDNA/Arabidopsis | 15,988 | 38.0 |
“ | MIPS_CDS v1.2/Brachypodium | 19,768 | 47.0 |
“ | Rice Genome Annotation_All_cDNA | 20,428 | 48.5 |