Table 1. ACST results on four colorectal cancer datasets.
CC1 | CC2 | CCms | CCade | ||||||||
Name | pv | adj.pv | Name | pv | adj.pv | Name | pv | adj.pv | Name | pv | adj.p |
Colorectal canc | 0.001 | 0.013 | Colorectalcanc | 0.005 | 0.095 | Colorectalcanc | 0.014 | 0.116 | Melanoma | 0.005 | 0.093 |
MAPK sigpath | 0.001 | 0.013 | Cell cycle | 0.012 | 0.106 | TLR sig path | 0.014 | 0.116 | Insulin sig path | 0.013 | 0.131 |
TLR sig path | 0.002 | 0.019 | Epith cell sig | 0.013 | 0.106 | Melanoma | 0.015 | 0.116 | Mineral abs | 0.019 | 0.131 |
Prion diseases | 0.003 | 0.023 | Shigellosis | 0.014 | 0.106 | Endomet canc | 0.018 | 0.116 | Cell cycle | 0.020 | 0.131 |
Bile secretion | 0.005 | 0.033 | Endomet canc | 0.019 | 0.106 | Thyroid canc | 0.018 | 0.116 | Aldoste-reg sod | 0.024 | 0.131 |
Epith cell sig | 0.008 | 0.045 | Thyroid canc | 0.019 | 0.106 | African trypanos | 0.020 | 0.116 | Colorectal canc | 0.030 | 0.131 |
Focal adhesion | 0.016 | 0.078 | Wnt sig path | 0.023 | 0.113 | Endomet canc | 0.032 | 0.131 | |||
Wnt sig path | 0.023 | 0.101 | S cell lung canc | 0.038 | 0.166 | Thyroid canc | 0.032 | 0.131 | |||
Acute myel leuk | 0.050 | 0.199 | Basal cell carc | 0.032 | 0.131 | ||||||
Hedgehog sigpath | 0.036 | 0.134 | |||||||||
S cell lung cancer | 0.048 | 0.164 |
The table presents results of ACST on four colorectal cancer datasets. Only significantly altered pathways (adj.p-value<0.25) are presented. Signaling pathways indicated for all datasets are written in bold while signaling pathway indicated more than once are written in italic. Epith cell sig stands for Epithelial cell signaling in Helicobacter pylori infection, S cell lung canc for Small cell lung cancer, African trypanos for African trypanosomiasis, Mineral abs for Mineral absorption and Aldoste-reg sod for Aldosterone-regulated sodium reabsorption.