Table 6.
Number and motif distribution of EST-SSRs
| Motif | Number of unigene sequences containing the number of repeats specified | |||
|---|---|---|---|---|
|
| ||||
| ≥6 times | ≥10 times | |||
|
|
|
|||
| n | (%) | n | (%) | |
| AG/TC | 1,284 | 24.4 | 608 | 11.0 |
| AT/TA | 271 | 5.2 | 127 | 2.3 |
| AC/GT | 344 | 6.5 | 156 | 2.8 |
| GC/CG | 17 | 0.3 | 13 | 0.2 |
| AAC/GTT | 45 | 0.9 | 24 | 0.4 |
| AAG/CTT | 88 | 1.7 | 42 | 0.8 |
| ACC/GGT | 120 | 2.3 | 60 | 1.1 |
| ACG/CGT | 26 | 0.5 | 15 | 0.3 |
| ACT/AGT | 57 | 1.1 | 24 | 0.4 |
| AGC/GCT | 37 | 0.7 | 24 | 0.4 |
| AGG/CCT | 81 | 1.5 | 35 | 0.6 |
| ATC/GAT | 52 | 1.0 | 28 | 0.5 |
| TAT/ATA | 24 | 0.5 | 13 | 0.2 |
| CGC/GCG | 23 | 0.4 | 10 | 0.2 |
|
| ||||
| Any SSR motifsa | 1,835 | 34.9 | 878 | 16.0 |
a
number of unigenes containing any SSR motifs listed in this table.