Table 1.
Operon | Strand | TSS positiona | TSS base | Sequence |
Match coverageb |
||
---|---|---|---|---|---|---|---|
−10 | −35 | Perfect | Best | ||||
paaTK | − | −213 | A | TAGCGT | TGGACA | 336 | 911 |
paaABCDEGJFH | + | −44 | G | TATCCT | TTGACC | 27 | 209 |
paaR | − | −76 | A | TACAGT | TTCCCG | 1 | 7 |
paaI | + | −60 | A | TAGACT | GTGAAA | 22 | 59 |
paaY | − | −54 | C | TAATAT | TACACT | 0 | 35 |
paaZ | + | −57 | A | TATACT | TTCACC | 21 | 170 |
Relative to the translation start codon.
Perfect match coverage and best match coverage are defined according to Blom et al. (4).