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. 2012 Feb 4;61(5):480–494. doi: 10.1270/jsbbs.61.480

Table 2.

Summary of transgenic approaches for improvement of seed components, agronomic traits, and functional genomics in soybean

Target traits Target gene Origin of target gene Target tissue Promoter Effect Transformation method1 Soybean genotype References
Seed component
 Seed protein β-casein gene bovine seed soybean lectin Accumulation of β-casein protein PB Jack Maughan et al. (1999)
15-kDa zein gene maize seed common bean β-phaseolin Accumulation of zein protein PB & AG Jack, F173 Dinkins et al. (2001), Reddy et al. (2003)
Gly m Bd 30K gene soybean seed soybean α-subunit of β-conglycinin Reduction of allergen (Gly m Bd 30K protein) PB Jack Herman et al. (2003)
Modified glycinin gene (V3-1) soybean seed soybean glycinin (gy2) Accumulation of V3-1 protein PB Jack El-Shemy et al. (2004)
11-kDa δ-zein gene maize seed soybean α′ subunit of β-conglycinin Accumulation of zein protein AG Williams 82 Kim and Krishnan (2004)
27-kDa γ-zein gene maize seed soybean α′ subunit of β-conglycinin Accumulation of zein protein PB Jack Li et al. (2005)
K99 fimbrial subunit gene (fanC) Escherichia coli seed cauliflower mosaic virus (CaMV) 35S Accumulation of FanC AG Thorne Piller et al. (2005)
Basic fibroblast growth factor (bFGF) gene human seed CaMV 35S or soybean glycinin (gy1) Accumulation of bFGF AG Sichuan Ding et al. (2006)
Modified β-conglycinin α′ subunit gene containing bioactive peptide (Novokinin, LPYPR, Rubiscolin) modified materials from soybean seed soybean α′ subunit of β-conglycinin Accumulation of bioactive peptides PB Jack Nishizawa et al. (2008)
Modified β-conglycinin α′ subunit gene (4novokinin-α′) modified materials from soybean seed soybean α′ subunit of β-conglycinin Accumulation of bioactive peptides Whisker Jack Yamada et al. (2008)
β-conglycinin α′ subunit gene soybean seed soybean glycinin (gy2) Reduction of β-conglycinin PB Jack Nishizawa et al. (2010)
Human growth hormone gene (hgh) human seed soybean α′ subunit of β-conglycinin Accumulation of mature form of hGH PB BR-16 Cunha et al. (2011)

 Oil Δ12 fatty acid desaturase gene (FAD2-1), soybean seed common bean β-phaseolin or Increase of oleic acid and AG A3237, Thorne Buhr et al. (2002)
Palmitoyl-thioesterase gene (FatB) soybean β-conglycinin decrease of saturated fatty acid
Δ6 desaturase gene Arabidopsis thaliana seed soybean β-conglycinin Production of γ-linolenic acid (GLA) and stearidonic acid (STA) AG A3237, Thorne, NE3001 Sato et al. (2004)
Δ5 desaturase gene, Δ6 desaturase gene, GLELO elongase gene, Δ15 desaturase gene Mortierella alpina 1S-4 (Δ5 and 6 desaturase, GLELO), soybean (Δ15 desaturase) seed soybean α′ subunit of β-conglycinin Production of arachidonic acid PB Jack Chen et al. (2006)
Δ6 desaturase gene, Δ15 desaturase gene (fad3) B.officinalis (Δ6 desaturase gene), A. thaliana (fad3) seed soybean β-conglycinin High accumulation of stearidonic acid (STA) AG Thorne, NE3001, 420-5 Eckert et al. (2006)
ω-3 fatty acid desaturase gene (GmFAD3) soybean seed soybean glycinin Reduction of α-linolenic acids (18:3) AG Jack Flores et al. (2008)
Δ6 desaturase gene (MpDES6), Δ6 elongase gene (MpELO1), Δ5 desaturase gene (MpDES5) Marchantia polymorpha seed soybean α′ subunit of β-conglycinin Production of of C20-LCPUFAs (long-chain polyunsaturated fatty acids) PB Jack Kajikawa et al. (2008)
Diacylglycerol acyltransferase 2A gene (UrDGAT2A) Umbelopsis ramanniana seed soybean α′ subunit of β-conglycinin Increase of oil content AG Undefined Lardizabal et al. (2008)
Δ12 fatty acid desaturase gene (GmFAD2-1) soybean seed soybean lectin Increase of oleic acid AG Heinong44 Wang and Xu (2008)
Sphingolipid compensation gene (SLC1) Saccharomyces cerevisiae seed common bean phaseolin Increase of oil content PB Jack Rao and Hildebrand (2009)
Fatty acid ω̄-6 desaturase 2 gene (FAD2), Acylacyl carrier protein thioesterase 2 genes (FATB-4 and FATB-5), Diacylglycerol acyltransferase gene (DGAT1), Dihydrodipicolinate synthetase gene (DHPS), Highlysine protein gene (BHL8), truncated cysteine synthase gene (CGS) soybean (FAD2, FATB4 and 5, CGS), Yarrowia lipolytica (DGAT1), Corynebacterium glutamicum (DHPS), barley (BHL8), seed soybean KTI3 (Kunitz trypsin inhibitor 3) Improvement of oil content and composition PB Undefined Li Z. et al. (2010)
Epoxygenase gene (SIEPX), Diacylglycerol acyltransferase genes (VgDGAT1 and VgDGAT2) Stokesia laevis (SIEPX), Vernonia galamensis (VgDGAT1and 2) seed common bean phaseolin Increase of epoxy fatty acid PB Jack Li R. et al. (2010)

 Amino acid Mutated aspartokinase gene (lysC-M4), Dihydrodipicolinic acid synthase gene (dapA) E. coli (lysC-M4), Corynebacterium (dapA) seed common bean β-phaseolin Increase of free lysine PB A2396, A2242, A5403 Falco et al. (1995)
Mutated anthranilate synthase gene (OASA1D) rice seed CaMV 35S or soybean gy2 Increase of free tryptophan PB Jack Ishimoto et al. (2010)
Mutated anthranilate synthase gene (OASA1D) rice seed soybean gy2 Increase of free tryptophan PB JQ1, JQ7, Jack Kita et al. (2010)
Mutated aspartate kinase genes (XbAK_E257K and XbAK_T359I) Xenorhabdus bovienii seed soybean 7Sα′ or Vicia faba USP99 Increase of threonine AG A3525 Qi et al. (2011)

 Secondary compound 2-methyl-6-phytylbenzoquinol methyltransferase gene (At-VTE3), γ-tocopherol methyl-transferase gene (At-VTE4) A. thaliana seed soybean α′ subunit of β-conglycinin Changes in tocophenol composition AG Undefined Van Eenennaam et al. (2003)
Transcription factor gene CRC (C1/R chimeric gene), Flavanone 3-hydroxylase gene (F3H) maize (CRC), soybean (F3H) seed common bean β-phaseolin Increase of isoflavones PB Jack Yu et al. (2003)
Phytase gene soybean seed soybean α′ subunit of β-conglycinin Reductiion of phytate content PB Jack Chiera et al. (2004)
γ-tocopherol methyl transferase gene A. thaliana seed CaMV 35S Increase of α-tocopherol content AG Pungsannamul-kong, Alchankong Kim et al. (2005)
myo-inositol-1-phosphate synthase gene (GmMIPS1) soybean seed CaMV 35S Reduction of phytate content PB Conquista Nunes et al. (2006)
Multidrug resistance-associated protein (MRP) gene soybean seed soybean KTI3 Reduction of phytate content PB Jack Shi et al. (2007)
γ-tocopherol methyl transferase gene Perilla frutescens seed pea vicilin Increase of α-tocopherol content PB Jack Tavva et al. (2007)
Chalcone synthase gene (CHS6), Isofravone synthase gene (IFS2), Phenylalanine ammonia-lyase gene (PAL5) soybean (CHS6, IFS2), bean (PAL5) seed soybean lectin Reduction of isoflavone PB Jack Zernova et al. (2009)
Homogentisate geranylgeranyl transferase gene (OsHGGT) rice germinating seed rice globulin or CaMV 35S Accumulation of tocotrienol AG Iksannamulkong Kim et al. (2011)
β-amyrin synthase gene (GmBAS1) soybean seed soybean α′ subunit of β-conglycinin Reduction of seed saponin content PB Jack Takagi et al. (2011)

Biotic resistance
 Insect resistance Insecticidal crystal protein gene (cry1Ab) Bacillus thuringiensis whole plant CaMV 35S with an alfalfa mosaic virus leader sequence Resistance to velvetbean caterpillar PB F376 (progeny of Peking ×Masshokutoukou 502) Parrott et al. (1994)
Insecticidal crystal protein gene (cry1Ac) B. thuringiensis whole plant CaMV 35S Resistance to coan earworm, soybean looper, tabacco budworm, velvetbean catepillar PB Jack Stewart et al. (1996)
Insecticidal crystal protoxin gene (cry1Ab) B. thuringiensis whole plant Nicotiana tabacum Prrn (np)+bacteriophage T7 of gene 10L Resistance to velvetbean caterpiller PB Jack Dufourmantel et al. (2005)
Pinellia ternata agglutinins gene (pta), Insecticidal crystal protein gene (cryIAc) Pinellia ternata (pta), B. thuringiensis (cryIAc) whole plant CaMV 35S Resistance to cotton bollworm AG Hefeng 25, Hefeng 35, Hefeng 39, Heinong 37, Heinong 43, Dongnong 42, Lefeng 39 Dang and Wei (2007)

 Nematode resistance Nematode resistance gene (Hs1pro-1) Beta procumbens root (ocs-UAS)3(mas-UAS-mas-P) Resistance to soybean cyst nematode PB Westag McLean et al. (2007)

 Virus resistance Coat protein precusor gene (CP-P) Bean pod mottle virus (BPMV) whole plant CaMV 35S Resistance to BPMV AG Fayette Di et al. (1996)
Capsid polyprotein gene (pCP) Bean pod mottle virus (BPMV) whole plant Figwort mosaic virus (FMV) 35S Resistance to BPMV PB Jack Reddy et al. (2001)
Coat protein gene soybean mosaic virus (SMV) whole plant CaMV 35S Resistance to SMV AG 9341 Wang et al. (2001)
Coat protein gene soybean mosaic virus (SMV) attenuated isolate (Aa15-M2) whole plant CaMV 35S Resistance to SMV PB Jack Furutani et al. (2006)
Coat protein gene soybean dwarf virus (SbDV) whole plant CaMV 35S Resistance to SbDV PB Jack Tougou et al. (2006, 2007)

 Fungus resisnance Oxalate oxidase gene (gf-2.8) Wheat Whole plant CaMV 35S Resistance to white mould AG AC Colibri Donaldson et al. (2001)
Oxalate decarboxylase gene (oxdc) Flammulina sp. whole plant CaMV 35S Resistance to white mould PB BR-16 Cunha et al. (2010)

Abiotic tolerance
 Drought stress l1-Pyrroline-5-carboxylate reductase gene (P5CR) A. thaliana whole plant soybean heat shock gene Tolerance to heat/drought stress AG Ibis De Ronde et al. (2004a, 2004b)
Molecular chaperone BiP (binding protein) gene (soyBiPD) soybean whole plant CaMV 35S Tolerance to drought stress PB Conquista Valente et al. (2009)

 Iron deficiency stress Ferric chelate reductase gene (FRO2) A. thaliana whole plant CaMV 35S Alleviation of iron deficiency chlorosis AG Thorne, A3237 Vasconcelos et al. (2006)

Herbicide resistance
Mutated 5-enolpyruvylshikimic acid 3- phosphate (EPSP) synthase gene petunia whole plant CaMV 35S Glyphosate tolerance AG Peking, Maple Prest Hinchee et al. (1988)
5-enolpyruvylshikimic acid 3-phosphate synthase gene (CP4 EPSPS) Agrobacterium sp. Strain CP4 whole plant CaMV 35S Glyphosate tolerance PB A5403 Padgette et al. (1995)
Acetohydroxyacid synthase gene (ahas) A. thaliana whole plant A. thaliana ahas Imazapyr tolerance PB BR-16, Doko RC, BR-91, Conquista Arãgao et al. (2000)
4-hydroxyphenylpyruvate dioxygenase gene (hppd) Pseudomonas fluorescens whole plant N. tabacum Prrn(np)+bacteriophage T7 of gene 10L Isoxaflutole tolerance PB Jack Dufourmantel et al. (2007)
Phosphinothricin (PPT) N-acetyltransferase genes (mat and hpat) bialaphos-resistant soil bacteria Streptomyces sp. Strain AB3534 (hpat), Nocardia sp. strain AB2253 (mat) whole plant CaMV 35S PPT tolerance PB Jack Kita et al. (2009)

Others
Vegetative storage protein gene (VspA) soybean whole plant CaMV 35S Reduction of VSPα and VSPβ AG Asgrow 3237 Staswick et al. (2001)
Feedback-insensitive anthranilate synthase (AS) α-subunit gene (ASA2) tabacco whole plant CaMV 35S Increase of free tryptophan PB Jack Inaba et al. (2007)
Ac transposase gene maize whole plant CaMV 35S Induction of transposition of Ds delineated element AG Bert, Thorne Mathieu et al. (2009)
GmTFL1b (TERMINAL FLOWER1b) for Dt1 soybean whole plant soybean GmTFL1b (Dt1) Complementation of the stem growth habit in determinate line AG KA Liu et al. (2010)
DICER-LIKE genes (DCL4a and DCL4b) soybean whole plant estrogen-inducible expression system (XVE system) Targeted mutagenesis A. rhizogenes Bert Curtin et al. (2011)
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AG: Agrobacterium, PB: Particle bombardment.