Table 3.

Summary of chromosome-wise information of 191 selected SNP markers used for evaluation of 1603 accessions

Chromosome	No. of SNP loci	Mean distance (bp)	Gene diversity
			Whole acc.	Cultivated soybean		Wild soybean
				Japanease	Exotic	Japanese	Exotic
Gm01	7	8,691,106	0.48	0.44	0.39	0.31	0.25
Gm02	10	5,258,957	0.42	0.33	0.44	0.32	0.19
Gm03	7	7,133,078	0.39	0.29	0.44	0.16	0.15
Gm04	11	4,783,855	0.45	0.36	0.42	0.33	0.26
Gm05	4	12,599,736	0.41	0.38	0.39	0.19	0.14
Gm06	12	4,505,019	0.44	0.37	0.44	0.33	0.27
Gm07	11	4,234,282	0.47	0.42	0.43	0.35	0.26
Gm08	13	3,665,927	0.44	0.41	0.42	0.29	0.28
Gm09	9	5,590,517	0.41	0.32	0.42	0.20	0.22
Gm10	9	5,693,703	0.44	0.41	0.39	0.33	0.30
Gm11	11	3,840,468	0.46	0.42	0.42	0.31	0.30
Gm12	13	2,942,636	0.45	0.41	0.44	0.30	0.21
Gm13	10	4,391,180	0.44	0.39	0.42	0.31	0.24
Gm14	6	9,683,581	0.45	0.39	0.44	0.35	0.37
Gm15	11	4,810,803	0.47	0.42	0.44	0.41	0.39
Gm16	8	5,067,648	0.47	0.45	0.42	0.30	0.31
Gm17	8	5,434,227	0.37	0.25	0.43	0.31	0.19
Gm18	11	6,220,394	0.47	0.42	0.43	0.34	0.24
Gm19	10	4,581,286	0.41	0.35	0.43	0.35	0.23
Gm20	10	5,000,491	0.45	0.40	0.45	0.34	0.33
Average	191 in total	5,176,591	0.44	0.38	0.43	0.31	0.26