Table 3.
Comparison of predicted genes located in the deleted region of chromosome 17 in the J10 mutant between soybean and Arabidopsis. Gene accession numbers of soybean and Arabidopsis are those in the Phytozome (http://www.phytozome.net/) and TAIR (http://www.arabidopsis.org/) databases, respectively
| Paralogs in Glycine max | Ortholog in Arabidopsis | Predicted gene product/putative function | ||
|---|---|---|---|---|
|
| ||||
| Chromosome 17 | Chromosome 13 | |||
| 1 | Glyma17g05030 | Glyma13g17450 | At4g33250 | EIF3K (translation initiation factor) |
| 2 | Glyma17g05040 | Glyma13g17440 | At3g43210 | Kinecin-like protein (microtubule motor) |
| 3 | Glyma17g05080 | Glyma13g17410 | At2g03140 | CAAX amino terminal protease family protein |
| 4 | Glyma17g05100 | Glyma13g17390 | BAB09012 | Pectin methylesterase-like protein |
| 5 | Glyma17g05120 | Glyma13g17380 | At3g43120 | Auxin-responsive protein-related |
| 6 | Glyma17g05130 | Glyma13g17370 | At4g21090 | Adrenodoxin-like ferredoxin 1 |
| 7 | Glyma17g05140 | Glyma13g17360 | At1g19240 | Unknown protein |
| 8 | Glyma17g05150 | Glyma13g17350 | At3g26060 | PRXQ (antioxidant/peroxiredoxine) |
| 9 | Glyma17g05160 | Glyma13g17340 | At1g19250 | FMO1 (flavin-dependent monoxygenase 1) |
| 10 | Glyma17g05170 | Glyma13g17330 | At3g43110 | Unknown protein |
| 11 | Glyma17g05180 | – | At5g20740 | Invertase / pectin methylesterase inhibitor family protein |
| 12 | Glyma17g05190 | Glyma13g17300 | At2g34350 | Noduline-like protein |
| 13 | Glyma17g05200 | Glyma13g17290 | KASII | |
| 14 | Glyma17g05220 | Glyma13g17270 | At1g19220 | ARF19 (auxin response factor 19) |
| 15 | Glyma17g05230 | Glyma13g17260 | – | GroES chaperonin |
| 16 | Glyma17g05240 | Glyma13g17250 | At5g20720 | CPN20 (chaperonin 20: calmodulin binding) |
| 17 | Glyma17g05250 | Glyma13g17240 | At5g20710 | BGAL7 (β-galactosidase 7) |