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. 2012 Jun 8;24(6):2649–2665. doi: 10.1105/tpc.112.098962

Table 1. Genes Encoding SODs in C. reinhardtii.

Gene Protein IDa RPKMb
FSD1 Cre10.g436050 481.0
MSD1 Cre02.g096150 281.0
MSD2 Cre13.g605150 82.8
MSD3 Cre16.g676150 4.6
MSD4 Cre12.g490300 0.2
MSD5 Cre17.g703150 0.2

SOD transcript abundance determined by RNA-sequencing in C. reinhardtii strain 2137 (data from the National Center for Biotechnology Information Gene Expression Omnibus, accession number GSE25124; Castruita et al., 2011). Cells were grown photoheterotrophically in nutrient-replete TAP medium (18 μM Fe).

a

Corresponding to the Au10.2 models in the version 4.0 genome assembly.

b

Reads per kilobase of exon per million mapped sequence reads (Mortazavi et al., 2008); paired-end reads mapped to Augustus 10.2 gene models.