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. 2012 Jul 27;7(7):e41983. doi: 10.1371/journal.pone.0041983

Table 3. Association analysis of rs28461391, rs3859501, rs12983273 on the pri-miRNA region of miRNAs-371-372-373 with risk of liver disease in HBV infected patients (n = 1,439).

rs# Minor allele frequency Codominant Dominant Recessive
Case Control OR (95%CI) P OR (95%CI) P OR (95%CI) P
HCC occurrence
HCC occurrence (n = 417) vs. non-occurrence (n = 618) among chronic HBV carriers
rs28461391 0.122 0.132 0.98(0.74–1.31) 0.91 0.93(0.67–1.29) 0.66 1.61(0.60–4.26) 0.34
rs3859501 0.373 0.414 0.75(0.61–0.92) 0.005 0.71(0.53–0.94) 0.02 0.66(0.45–0.96) 0.03
rs12983273 0.058 0.044 1.22(0.78–1.92) 0.39 1.22(0.78–1.92) 0.39 . .
ht1 (C-C-C) 0.522 0.484 1.25(1.04–1.52) 0.02 1.26(0.92–1.72) 0.15 1.47(1.07–2.01) 0.02
ht2 (C-A-C) 0.299 0.341 0.74(0.60–0.91) 0.005 0.72(0.55–0.95) 0.02 0.57(0.36–0.91) 0.02
ht3 (T-C-C) 0.104 0.100 1.09(0.80–1.49) 0.59 1.02(0.73–1.45) 0.89 2.72(0.78–9.57) 0.12
ht4 (C-A-T) 0.056 0.042 1.20(0.76–1.90) 0.43 1.20(0.76–1.90) 0.43 . .
HCC occurrence (n = 417) vs. non-occurrence (n = 305) among liver cirrhosis patients
rs28461391 0.122 0.121 1.04(0.75–1.45) 0.82 0.99(0.68–1.43) 0.95 1.84(0.54–6.23) 0.33
rs3859501 0.373 0.444 0.69(0.55–0.86) 0.001 0.60(0.43–0.84) 0.003 0.63(0.41–0.95) 0.03
rs12983273 0.058 0.043 1.27(0.75–2.14) 0.37 1.27(0.75–2.14) 0.37 . .
ht1 (C-C-C) 0.522 0.466 1.33(1.07–1.65) 0.01 1.30(0.91–1.84) 0.15 1.67(1.16–2.42) 0.006
ht2 (C-A-C) 0.299 0.370 0.67(0.53–0.85) 0.0009 0.65(0.47–0.89) 0.007 0.49(0.30–0.81) 0.005
ht3 (T-C-C) 0.104 0.090 1.18(0.82–1.70) 0.38 1.13(0.75–1.69) 0.56 2.82(0.58–13.73) 0.20
ht4 (C-A-T) 0.056 0.043 1.24(0.73–2.10) 0.43 1.24(0.73–2.10) 0.43 . .
HBV clearance
Chronic HBV carriers (n = 1,035) vs. spontaneously recovered (n = 404)
rs28461391 0.128 0.146 0.86(0.68–1.08) 0.19 0.88(0.67–1.15) 0.34 0.55(0.26–1.15) 0.11
rs3859501 0.398 0.398 1.01(0.85–1.19) 0.95 0.96(0.75–1.22) 0.73 1.10(0.79–1.52) 0.57
rs12983273 0.049 0.057 0.88(0.61–1.27) 0.49 0.90(0.62–1.31) 0.58 . .
ht1 (C-C-C) 0.499 0.481 1.07(0.91–1.26) 0.44 0.99(0.76–1.28) 0.92 1.22(0.92–1.60) 0.16
ht2 (C-A-C) 0.324 0.316 1.04(0.87–1.24) 0.66 1.02(0.81–1.29) 0.85 1.14(0.77–1.70) 0.52
ht3 (T-C-C) 0.102 0.121 0.82(0.64–1.06) 0.13 0.84(0.63–1.11) 0.23 0.50(0.21–1.21) 0.13
ht4 (C-A-T) 0.048 0.057 0.86(0.59–1.24) 0.41 0.88(0.60–1.28) 0.49 . .

Minor allele frequencies and P values for logistic analyses of three alternative models (co-dominant, dominant, and recessive models) are shown.

Abbreviations: HCC, hepatocellular carcinoma; HBV, hepatitis B virus; OR, odds ratio; CI, confidence interval.