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. 2012 Jul 27;7(7):e40449. doi: 10.1371/journal.pone.0040449

Table 7. Test of hypotheses for Mixed Model Analysis of Variance, impact of developmental competence, patient variability and experience (i.e. qPCR series) on the level of gene expression.

Effects / yijkn (Gene) Pi (Phenotype) Aj (Patient) Qk (qPCR series) (PA)ij (Patient * Phenotype)
ANG 0.1353 <0.0001* 0.0044* 1.00
PLIN2 0.3113 0.6204 0.4347 0.0550
RGS2 0.0201* 0.0014* 0.0168* 0.1880
PTX3 0.0991 0.9196 0.0229* <0.0001*

yijkn gene expression level in nth cumulus cells for a gene according to the ith phenotype from jth patient after kth qPCR series; μ gene expression level mean; Pi fixed effect of ith phenotype (i =  CCB+ cumulus cells from mature oocyte yielding a blastocyst at day 5/6 of in vitro culture once fertilised and i =  CCB- cumulus cells from mature oocyte which stopped developing at the embryo stage at day 5/6 of in vitro culture once fertilised); Aj random effect of the jth patient (j = 1 to 29); Qk random effect of kth qPCR series (k = 1 to 7); (PA)ij first-order interaction between variables phenotype and patient;

*

Statistical significance of model factors for the levels of expression of the four genes (p<0.05).