Table 7. Test of hypotheses for Mixed Model Analysis of Variance, impact of developmental competence, patient variability and experience (i.e. qPCR series) on the level of gene expression.
Effects / yijkn (Gene) | Pi (Phenotype) | Aj (Patient) | Qk (qPCR series) | (PA)ij (Patient * Phenotype) |
ANG | 0.1353 | <0.0001* | 0.0044* | 1.00 |
PLIN2 | 0.3113 | 0.6204 | 0.4347 | 0.0550 |
RGS2 | 0.0201* | 0.0014* | 0.0168* | 0.1880 |
PTX3 | 0.0991 | 0.9196 | 0.0229* | <0.0001* |
yijkn gene expression level in nth cumulus cells for a gene according to the ith phenotype from jth patient after kth qPCR series; μ gene expression level mean; Pi fixed effect of ith phenotype (i = CCB+ cumulus cells from mature oocyte yielding a blastocyst at day 5/6 of in vitro culture once fertilised and i = CCB- cumulus cells from mature oocyte which stopped developing at the embryo stage at day 5/6 of in vitro culture once fertilised); Aj random effect of the jth patient (j = 1 to 29); Qk random effect of kth qPCR series (k = 1 to 7); (PA)ij first-order interaction between variables phenotype and patient;
Statistical significance of model factors for the levels of expression of the four genes (p<0.05).