Table 3.
Numbers and diversity of bacterial, archaeal and fungal sequences
| Group | Load*) | Reactor type | Sample name | Number of seq. | Average read length**) | Observed OTUs | Diversity (Shannon) | Diversity (Simpson) | Richness (Chao1) | Richness (Ace) |
|---|---|---|---|---|---|---|---|---|---|---|
| Bact. |
3 |
meso |
M1 |
5775 |
151 |
610 |
4,11 |
0,09 |
1304 |
2044 |
| |
8 |
meso |
M2 |
4531 |
151 |
483 |
4,43 |
0,04 |
1171 |
1631 |
| |
3 |
thermo |
M3 |
2056 |
142 |
444 |
4,68 |
0,05 |
1065 |
2070 |
| |
8 |
thermo |
M4 |
5083 |
146 |
438 |
3,87 |
0,07 |
1127 |
1827 |
| Arch. |
3 |
meso |
M1 |
7926 |
104 |
135 |
2,33 |
0,17 |
318 |
510 |
| |
8 |
meso |
M2 |
5593 |
109 |
109 |
1,85 |
0,33 |
227 |
339 |
| |
3 |
thermo |
M3 |
5521 |
106 |
95 |
1,02 |
0,56 |
227 |
375 |
| |
8 |
thermo |
M4 |
10573 |
107 |
167 |
1,66 |
0,34 |
387 |
565 |
| Fungi |
3 |
meso |
M1 |
2850 |
147 |
456 |
4,43 |
0,06 |
1068 |
1609 |
| |
8 |
meso |
M2 |
8714 |
233 |
1602 |
5,57 |
0,03 |
3192 |
4485 |
| |
3 |
thermo |
M3 |
8460 |
209 |
1386 |
5,12 |
0,05 |
2617 |
4304 |
| 8 | thermo | M4 | 16893 | 220 | 2162 | 5,22 | 0,06 | 3393 | 4516 |
*) kg VS m-3.
**) after removing adapters and primers.