Table 3. Statistics of reads from Golden Promise barley (GP) and Golden Promise transgenic barley over-expressing TaDREB3 [GP(TaDREB3)].

non-chloroplast reads						chloroplast reads (0 mismatches)
> = 1	GP		GP(TaDREB3)	fraction		> = 1	GP	GP(TaDREB3)	fraction
unique reads	958901		422195	2.271228		unique reads	30387	23477	1.294331
total read count	3575645		2585109	1.38317		total read count	2651785	3322007	0.798248
sample specific reads	865500		328794	2.632347		sample specific reads	20673	2545	8.122986
common reads	93401			log2 sum	log2 fraction	common reads	5922		log2 sum	log2 fraction
|log2| > = 1	18346	15477		33823	36.21267	|log2| > = 1	1252	1348	2600	43.90409
> = 4	GP	GP(TaDREB3)		fraction		> = 4	GP	GP(TaDREB3)	fraction
unique reads	44148	24695		1.78773		unique reads	3929	3828	1.026385
total read count	2535876	2132417		1.189203		total read count	2617582	3296389	0.794076
sample specific reads	10367	4252		2.438147		sample specific reads	555	181	3.066298
common reads	42333			log2 sum	log2 fraction	common reads	3518		log2 sum	log2 fraction
|log2| > = 1	13899	9897		23796	56.21147	|log2| > = 1	1252	851	2103	59.77828
> = 10	GP	GP(TaDREB3)		fraction		> = 10	GP	GP(TaDREB3)	fraction
unique reads	16260	10123		1.606243		unique reads	1442	1574	0.916137
total read count	2382398	2050931		1.161618		total read count	2603761	3283687	0.792938
sample specific reads	859	286		3.003497		sample specific reads	42	29	1.448276
common reads	18293			log2 sum	log2 fraction	common reads	1736		log2 sum	log2 fraction
|log2| > = 1	6222	3431		9653	52.76882	|log2| > = 1	670	434	1104	63.59447