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. 2012 Aug 1;7(8):e42030. doi: 10.1371/journal.pone.0042030

Table 4. Mapped barley miRNAs in miRBase.

miRNA miRNA sequence GPread count GP(TaDREB3)read count GP(TaDREB3)normalised log2
hvu-miR5048 UAUUUGCAGGUUUUAGGUCUAA 4547 2106 2912.955844 −0.642431171
hvu-miR159a/bhvu-miR159a* UUUGGAUUGAAGGGAGCUCUGGAGCTCCTATCATTCCAATGA 22465 42602 5892.303845 1.391473899
hvu-miR444b UGCAGUUGCUGUCUCAAGCUU 64 30 41.4950975 −0.625131008
hvu-miR1120 ACAUUCUUAUAUUAUGGGACGGAG 387 94 130.0179722 −1.573622508
hvu-miR444a UUGCUGCCUCAAGCUUGCUGC 1 0 0 #NUM!
hvu-miR156 UGACAGAAGAGAGUGAGCACA 140769 213440 295223.787 1.068479308
hvu-miR1436 ACAUUAUGGGACGGAGGGAGU 8 2 2.766339833 −1.532021604
hvu-miR5050 UUGAGGUCGUUCAACCAGCAA 57 27 37.34558775 −0.610024116
hvu-miR5051hvu-miR5051* UUUGGCACCUUGAAACUGGGACCAGTTTCAAGGTTTCAAAGC 41 50 6.915849583 0.789906491
hvu-miR171 UGAUUGAGCCGUGCCAAUAUC 158 88 121.7189527 −0.376370733
hvu-miR168-3phvu-miR168-3p* GAUCCCGCCUUGCACCAAGUGAAUCCCGCCTTGCACCAAGTGAAT 404324 293248 405.2687856 0.004523768
hvu-miR399 UGCCAAAGGAGAUUUGCCCCG 2 1 1.383169917 −0.532021604
hvu-miR5049 UCCUAAAUACUUGUUGUUGGG 549 121 167.3635599 −1.713820705
hvu-miR397 CCGUUGAGUGCAGCGUUGAUG 8 7 9.682189416 0.275333318
hvu-miR166/b/c UCGGACCAGGCUUCAUUCCCC 19883 6967 9636.544809 −1.044947586
hvu-miR1126 UCAACUAUGGACUACAUACGGAA 13 0 0 #NUM!
hvu-miR5052 ACCGGCUGGACGGUAGGCAUA 11 3 4.14950975 −1.406490722
hvu-miR168-5p UCGCUUGGUGCAGAUCGGGAC 420777 179792 248682.8857 −0.758748623
hvu-miR5053 CGCAGCUGUAGUCGCCGGCGU 24 5 6.915849583 −1.795056009

Note: GP-Golden Promise barley;

GP(TaDREB3)-Golden Promise transgenic barley over-expressing TaDREB3;

miRNA*, star sequence and read count are highlighted in blue.