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. 2012 Aug 1;7(8):e42030. doi: 10.1371/journal.pone.0042030

Table 7. Down-regulated miRNAs in Golden Promise transgenic barley over-expressing TaDR EB3.

miRNA Target Accession known annotation New annotation
osa-miR164d/sbi-miR164b/zma-miR164f/bdi-miR164c/far-miR164a/b TC196726 TC205144 TC208432 TC211596 TC213127DN183772 DN156119 TC228953 TC226313 TC226106 NACtranscriptionfactor (TF) unknown protein, protein kinase, sperm protamine-P1,phytosulfokine-alpha 1 precursor
miR166 CV063912 TC231714 TC204606 HD-ZIPIII TF unknown protein
tae-miR167b DN178141 DN156631 TC228910 TC222640 Auxinresponse TF unknown protein, protein kinase Nek5
sof-miR168b TC216443 TC205587 NP315934 Argonaute1 unknown protein, fowl adenovirus D, flame chlorosis virus-like agent
miR169 TC205164 TC211039 TC199079 CCAAT-binding TF unknown protein, SRPK4,
vvi-miR172d/ata-miR172 TC235219 TC199223 TC196893 TC223285 AL499992AL501298 BQ464727 TC229495 TC200442 BM442236TC206014 TC206508 TC208243 CD053703 APETALA2 TF unknown protein, Sporulation related precursor, succinyl-CoA ligase beta subunit, squalene monooxygenase flagellar hook-associated protein FlgK precursor,
zma-miR319b*/d* TC197194 BF260639 TC223199 TC223334 TC229714BG343280 BE454497 TCP TF unknown protein, 40S ribosomal protein S15a-1
zma-miR396f*/osa-miR396f-3p BJ458177 CK568233 TC221734 TC220586 TC214896TC227263 Growth-regulating TF unknown protein, ribosomal protein S13e, glycin-rich protein,Kelch repeat-containing F-box-like protein
osa-miR827a/b/zma-miR827/bdi-miR827/ssp-miR827 BJ470052 GH217971 TC221516 BJ468837 TC197379EX575934 SPX protein unknown protein, T2P11.4 protein, ATP-dependent Clp protease ATP-binding subunit, aberrant pollen transmission 1
hvu-miR1120 CK566710 TC196415 TC227275 TC201904 TC211215TC212619 BE231018 TC203981 Not available unknown protein, TAK14
osa-miR1426 TC211645 TC227152 BQ464676 BF065989 TC208577DN183702 TC236776 TC237637 Not available unknown protein, ADR183Cp, Receptor-like kinase
hvu-miR5049 TC211425 TC203435 TC210715 BI779287 DN158159TC208187 BM101048 TC198208 Not available unknown protein, tubby protein-like, non-specific lipid-transfer protein, resistance-related receptor-like kinase,Lipase class 3-like, farnesyl pyrophosphate synthase
hvu-miR5052 Not available no result
hvu-miR5053 TC222348 TC204313 TC197442 TC229752 BE214070BF264468 BI951909 TC228474 BE213779 BF628941BG299890 TC232455 BI956149 BE411948 Not available Unknown protein, Myb-related protein,chlorophyll a/b-binding protein CP29 precursor, AGAP011446-PA
bdi-miR5054 Not available no result
bdi-miR5062a/b TC199433 CA014897 Not available unknown protein
osa-miR5072 Not available no result
osa-miR5083 TC202028 Not available unknown protein
tae-miR5084 TC196125 BY852481 BG365127 Not available pyruvate dehydrogenase kinase isoform 1, potassium transporter
tae-miR5085 GH213771 AJ480573 TC207422 TC224281 TC200097TC199118 DN186570 CK124439 TC221808 TC215345 Not available unknown protein, 23 kDa jasmonate-induced protein, NADH dehydrogenase subunit 2, OSE2-like protein, Nucellin-like aspartic protease
rgl-miR5139 Not available no result
bdi-miR5169 BJ447165 TC223375 TC234516 GH210985 TC198932TC219591 BF256760 TC224793 DN157252 TC237517 Not available unknown protein, probable 3-carboxymuconate cyclase protein,Surface antigen protein 2, cell death associated protein, DP protein
bdi-miR5200 TC210538 TC223555 TC202855 TC232508 TC208205 Not available unknown protein, FT, FT-like protein