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. 2012 Aug 2;8(8):e1002629. doi: 10.1371/journal.pcbi.1002629

Figure 3. Backrubs at α-helix N-caps.

Figure 3

Crystal structure ensembles for Asn/Asp (light green) vs. Ser/Thr (light blue) at the N-cap position are related by a backrub. Lowest-energy BRDEE conformations for the N-terminus of an ideal α-helix (see Methods) with Asn (dark green) vs. Ser (dark blue) have a closely similar relationship. Cα and Cβ displacements between Asn/Asp and Ser/Thr for both average crystal structures (lighter, in parentheses) and low-energy BRDEE conformations (darker) evoke a hinge-like backrub operation. Ensemble i+3 sidechain-mainchain N-cap H-bonds are illustrated with “pillows” of green all-atom contact dots [44].