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. 2012 Aug 3;7(8):e42639. doi: 10.1371/journal.pone.0042639

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© 2012 Sun et al

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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The distribution of overlapping microhomologies at junctions was compared between the three datasets (gen48, gen144 and gen240) and one simulated dataset using 20 million in silico chimeric reads. The observed junction microhomology distribution in the datasets gen48, gen144 and gen 240 were represented by triangles and the simulated distributions were represented by boxplot. (A) Comparison between the dataset gen48 and the simulated dataset (181 rearrangements). (B) Comparison between the dataset gen144 and the simulated dataset (120 rearrangements). (C) Comparison between the dataset gen240 and the simulated dataset (42 rearrangements).