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. Author manuscript; available in PMC: 2012 Aug 6.
Published in final edited form as: J Drugs Dermatol. 2012 May;11(5):626–630.

Table 2.

Primer sequence and location

Gene and GenBank
accession #
Location in cDNA Primer sequence (actual sequence)
hGAPDH
# M17851
outer primers:
bp 618-647
bp 997-968
inner primers:
bp 681-710
bp 1000-971
inner-inner primers:
bp 617-646
bp 936-907

5’-CATCCCTGCCTCTACTGGCGCTGCCAAGGC-3’
5’-AGGCCATGAGGGCCATGAGGTCCACCACCC-3’

5’-TGTGGGCAAGGTCATCCCTGAGCTG AACGG-3’
5’-TGTTGCTGTAGCCAAATTCGTTGTCATACC-3’

5’-GAAGCTCACTGGCATGGCCTTCCGTGTCCC-3’
5’-AGGAAATGAGCTTGACAAAGTGGTCGTTGA-3’
hRORγT #U16997 outer primers:
bp 1231-1260
bp 1590-1561
inner primers:
bp 1262-1291
bp 1560-1531
inner-inner primers:
bp 1293-1322
bp 1526-1495

5'-TTCGAGCCTTGGGCTGCAGCGAG CTCATC-3'
5'-GCTGAAGAGCTCCTTGTAGAGTGGAGGGAA-3'

5'-GCTCCATCTTTGACTTCTCCCACTCCCTAA-3'
5'-AGCGGCTTGGACCACGATGGGGTGGAGGTC-3'

5'-TGCCTTGCATTTTCCGAGGA TGAGATTGC-3'
5'-AAGATCTGCAGCCTTTCCACATGC TGGCTACA-3'
hCD70 #
BC000725)
outer primers:
bp 301-330
bp 660-631
inner primers:
bp 331-360
bp 630-601
inner-inner primers:
bp 361-390
bp 600-571

5’-CAGGACCCCAGGCTATACTGGCAGGGGGGC-3’
5’-CACTCCAAAGAAGGTCTCATCAGTGTTTCG-3’

5’-CCAGCACTGGGCCGCTCCTTCCTGCATGGA-3’
5’-GGAAGGCAAAAGTGTCCCAGTGAGGTTGGT-3’

5’-CCAGAGCTGGACAAGGGGCAGCTACGTATC-3’
5’-GCAGAGTGTGTCCCCTCGGGCCAGGGGCGT-3’
HCD27
# NM_001242
outer primers:
bp 541-570
bp 990-961
inner primers:
bp 571-600
bp 960-931
inner-inner primers:
bp 601-630
bp 930-901

5’-GCAGTGCAGGGACAAGGAGTGCACCGAGTG-3’
5’-GGGGAGCAGGCAGGCTCCGGTTTTCGGTAA-3’

5’-TGATCCTCTTCCAAACCCTTCGCTGACCGC-3’
5’-CTTCCCTGGATGGGGATGGAGCTGCCCTCC-3’

5’-TCGGTCGTCTCAGGCCCTGAGCCCACACCC-3’
5’-TCCTCCCTGGGGCAGCTGTAACGACAAGGC-3’
hIL-17A
# NM_002190
outer primers:
bp 361-390
bp 780-750
inner primers:
bp 391-420
bp 750-721
inner-inner primers
bp 421-450
bp 721-691

5’-GTGGACTACCACATGAACTCTGTCCCCATC-3’
5’-CATAAATAACTTAAAGCCCTTAAAAAAGTA-3’

5’-CAGCAAGAGATCCTGGTCCTGCGCAGGGAG-3’
5’-AACTTGAAGCAAATTGGTACTCAGTCAAAC-3’

5’-CCTCCACACTGCCCCAACTCCTTCCGGCTG-3’
5’-CTTCCTTCTTGGAAAGAGGGAAAGGTAATT-3’
hIL-17B
# NM_014443
outer primers:
bp 121-150
bp 590-561
inner primers:
bp 391-420
bp 560-531
inner-inner primers:
bp181-210
bp 530-501

5’-GCCCCAAAAGCAAGAGGAAGGGGCAAGGGC-3’
5’-GAAGATGCAGGAGCAGCCCACAGCGATGGT-3’

5’-GGCCTGGGCCCCTGGCCCCTGGCCCTCACC-3’
5’-CTCCATGACTGCGCGCTGGCGGCAAGGCCC-3’

5’-AGGTGCCACTGGACCTGGTGTCACGGATGA-3’
5’-TGTGCGGGGCGGTGGCGGGCAGAGGCGGCG-3’
hIL-17C
# NM_013278
outer primers:
bp 241-270
bp 640-611
inner primers:
bp271-300
bp 610-581
inner-inner primers:
bp 301-330
bp 580-551

5’-AGCCCTGGTGTCCAGCCTGGAGGCAGCAAG-3’
5’-CACTGAACGGGGCAGCACGCAGGTGCAGCC-3’

5’-CCACAGGGGGAGGCACGAGAGGCCCTCAGC-3’
5’-ACGGGGACGTGGATGAACTCGGTGTGGAA-3’

5’-TACGACCCAGTGCCCGGTGCTGCGGCCGGA-3’
5’-GGCAAAGGCCCCAGGTGTGGGGAGCCCCGA-3’
hIL-17D
# NM_138284
outer primers:
bp 241-270
bp 810-781
inner primers:
bp 271-300
bp 780-751
inner-inner primers:
bp 301-339
bp 750-721

5’-CGCCTGGCGGCCGGCGTGCTCAGTGCCTTC-3’
5’-CCAGCGGGCGCGTCGTTGGGGCCCAGCAGG-3’

5’-CACCACACGCTGCAGCTGGGGCCGCGTGAG-3’
5’-AGCTTGGCGCCCTGTTTGTCGATGCTGGAG-3’

5’-CAGGCGCGCAACGCGAGCTGCCCGGCAGGG-3’
5’-TTGATGCTGTCTGCGTCCTTCTCCGGCTCG-3’
hIL-17E
# NM_022789
outer primers:
bp 421-450
bp 840-810
inner primers:
bp 451-480
bp 810-781
inner-inner primers:
bp 481-510
bp 780-751

5’-CAGCTGCTGCCCCAGCAAAGGGCAGGACAC-3’
5’-CCCATCACACGGGGCCGCACACACACACAA-3’

5’-CTCTGAGGAGCTGCTGAGGTGGAGCACTGT-3’
5’-GCTAAGGAAACACGGTACAGCCTGCGCTCC-3’

5’-GCCTGTGCCTCCCCTAGAGCCTGCTAGGCC-3’
5’-AGGCAGTAGCCCTTGTGGGTGCCCTTCTCG-3’
hIL-17F
# BC070124
outer primers:
bp 81-110
bp 540-511
inner primers:
bp 111-140
bp 510-481
inner-inner primers:
bp 141-170
bp 480-451

5’-AAGACCCTGCATGGCCCAGCCATGGTCAAG-3’
5’-GGGTGACGCAGGTGCAGCCAACAGTCACCA-3’

5’-TACTTGCTGCTGTCGATATTGGGGCTTGCC-3’
5’-GCACCTTCTCCAACTGGAAAGAAACAGAGC-3’

5’-TTTCTGAGTGAGGCGGCAGCTCGGAAAATC-3’
5’-AGCCTTGGTGCTTCCTCCGGACGACCAGGG-3’
HPLZF-1
# BC029812
outer primers:
bp 1891-1920
bp 2220-2161
inner primers:
bp 1921-1950
bp 2160-2131
inner-inner primers:
bp 1951-1980
bp 2160-2131

5’-GAGTTCTGTGGCAGCTGCTTCCGGGATGAG-3’
5’-CGGGATCTCCTCGGGCTTGTGGCCCTTCAT-3’

5’-AGCACACTCAAGAGCCACAAACGCATCCAC-3’
5’-GTGCTTCTGCATGGAGGAGAGGCTGGGGCA-3’

5’-ACGGGTGAGAAACCCTACGAGTGCAATGGC-3’
5’-GTACTCTGTGCAGATGGTGCA CTGGTAGGG-3’
HCTLA4
# AF414120
outer primers:
bp 211-240
bp 480-461
inner primers:
bp 245-275
bp 460-431
inner-inner primers:
bp 281-306
bp 425-396

5’-CCTGGCCCTGCACTCTCCTGTTTTTTCTTC-3’
5’-ATCCCTGTCTTCTGCAAAGCAATGCACGTG-3’

5’-CATGTAGGTTGCCGCACAGACTTCAGTCAC-3’
5’-ATGGAATCATCTAGGAAGG TCAACTCATTC-3’

5’- GCCTGCTGTGGTACTGGCCAGCAGCC -3’
5’-ACTTGATTTCCACTGGAGGTGCCCGTGCAG-3’
hFoxP3
# AF277993
outer primers:
bp 961-990
bp 1440-1471
inner primers:
bp 991-1020
bp 1410-1381
inner-inner primers:
bp 1021-1050
bp 1380-1351

5’-CCCACCTGGCTGGGAAAATGGCACTGACCA-3’
5’-AGGCTTCATCTGTGGCATCATCCGACAAGG-3’

5’-GCTCCTGCTGCATCGTAGCTGCTGGCAGCC-3’
5’-CCCGCACAAAGCACTTGTGCAGACTCAGGT-3’

5’-CGGTCCACACAGCCCCCTTCTCGCTCTCCA-3’
5’-TCCGTTTCTTGCGGAACTCCAGCTCATCCA-3’
hIL22 #
NM_020525
outer primers:
bp 121-150
bp 590-561
inner primers:
bp 151-180
bp 560-531
inner-inner primers:
bp 181-210
bp 530-501

5’-TCTTGGCCCTCTTGGTACAGGGAGGAGCAG-3’
5’-AATGCAGGCATTTCTCAGAGACATAAACAG-3’

5’- CTGCGCCCATCAGCTCCCACTGCAGGCTTG-3’
5’-CAAATCCAGTTCTCCAATTGCTTTGATCTC-3’

5’- ACAAGTCCAACTTCCAGCAGCCCTATATCA-3’
5’-TCCACTCTCTCCAAGCTTTTTCACTGAGAC-3’
hiNOS2 #
NM_000625.4
outer primers:
bp 3121-3150
bp 3720-3691
inner primers:
bp 3151-3180
bp 3690-3661
inner-inner primers:
bp 3181-3210
bp 3660-3631

5’-CCCCAAGACCCAGTGCCCTGCTTTGTGCGG-3’
5’-CGCTGACATCTCCAGGCTGCTGGGCTGCAC-3’

5’-AATGCCAGCGGCTTCCACCTCCCCGAGGAT-3’
5’-CGCCACCCTGTCCTTCTTCGCCTCGTAAGG-3’

5’-CCCTCCCATCCTTGCATCCTCATCGGGCCT-3’
5’-AAATTCTGCACCAAAGATATCTTCGTGATA-3’
hARNT #
NM_001668
outer primers:
bp 2101-2130
bp 2490-2461
inner primers:
bp 2131-2160
bp 2460-2431
inner-innr primers:
bp 2161-2190
bp 2430-2401

5’-CTACCCAGGCTACTGCTAAGACTCGTACTT-3’
5’-TAGTTAGATCAGGGAATTCTTCATTGTTGT-3’

5’-CCCAGTTTGGTGTGGGCAGCTTTCAGACTC-3’
5’-AGCTGTTGCTCTGATCTCCCAGCATGGACA-3’

5’-CATCCTCCTTCAGCTCCATGTCCCTCCCTG-3’
5’-GCATCTCCTGGAAGACCTCAGGCTGGCCAG-3’
hIDO #
NM_002164.4
outer primers:
bp 871-900
bp 1320-1291
inner primers:
bp 901-930
bp 1290-1261
inner-inner primers:
bp 931-960
bp 1260-1231

5’-TGGGAAGACCCAAAGGAGTTTGCAGGGGGC-3’
5’-TTCCTTCAAAAGGGATTTCTCAGTTGTACT-3’

5’-AGTGCAGGCCAAAGCAGCGTCTTTCAGTGC-3’
5’-TCTTACAGTCTTCAGGAAATTCATTAAATC-3’

5’-TTTGACGTCCTGCTGGGCATCCAGCAGACT-3’
5’-AGTGCCTCCAGTTCCTTTGGCTTCCAGTTT-3’
hGARP #
Z24680.1
outer primers:
bp 1591-1620
bp 2070-2041
inner primers:
bp 1621-1650
bp 2040-2011
inner-inner primers:
bp 1651-1680
bp 2010-1981

5’-GGGCAACGGGCTGATGGTCCTGCAGGTGGA-3’
5’-TGTTGGTTAAACTTCTGCCGGCGGACGCAG-3’

5’-CCTGCCCTGCTTCATCTGCCTCAAGCGGCT-3’
5’-CAGCAGGCGGCCAGCGTGGTGCGGAGGATG-3’

5’-CAATCTTGCCGAGAACCGCCTGAGCCACCT-3’
5’-GCAGAGACCAGTATGAAGGTGAGGATGATG-3’
hIL9 #
NM_000590
outer primers:
bp 21-50
bp 440-411
inner primers:
bp 51-80
bp 410-381
inner-inner primers:
bp 81-110
bp 380-351

5’-GCCATGGTCCTTACCTCTGCCCTGCTCCTG-3’
5’-CTTGCCTCTCATCCCTCTCATCTTTTCTTT-3’

5’-TGCTCCGTGGCAGGCCAGGGGTGTCCAACC-3’
5’-CTGGAAAATTTCCAGAAGACTCTTCAGAAA-3’

5’-TTGGCGGGGATCCTGGACATCAACTTCCTC-3’
5’-TGTCAGCGCGTTGCCTGCCGTGGTTTGGTT-3’
hCD46 #
NM_002389.4
outer primers:
bp 691-720
bp 1260-1231
inner primers:
bp 721-750
bp 1230-1201
inner-inner primers:
bp 751-780
bp 1200--1271

5’-ACACACCTTTAGTGAAGTAGAAGTATTTGA-3’
5’-CAAATTACTGCAACTCCAACAACTATGGCA-3’

5’-GTATCTTGATGCAGTAACTTATAGTTGTGA-3’
5’-ATAACAATCACAGCAATGACCCAAACATCC-3’

5’-TCCTGCACCTGGACCAGATCCATTTTCACT-3’
5’-AAACTGTCAAGTATTCCTTCCTCAGGTTTA-3’
hAHR #
BC070080.1
outer primers:
bp 2611-2640
bp 3060-3031
inner primers:
bp 2641-2670
bp 3030-3001
inner-inner primers:
bp 2671-2700
bp 3000-2971

5’-ATGCCTTATACACAGAACTTTATTTCCTGT-3’
5’-TGTCAAATCAGGAAAAGGTCTGGCTTCTGA-3’

5’-AATCAGCCTGTATTACCACAACATTCCAAA-3’
5’-CGGATGATGAAGTGGCTGAAGATGTGTGGT-3’

5’-TGTACAGAGCTGGACTACCCTATGGGGAGT-3’
5’-AGTCTGAGTGTTATTTATGTTATTTAATTC-3’