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. 2012 Jul 26;5:52. doi: 10.1186/1754-6834-5-52

Table 5.

Identified fungal cell wall degradation/remodeling proteins and spectrum counts on 1, 3, 7, and 14 days

 
 
 
 
Spectrum countc
 
Accession numbera GH familya Identified proteinsa MW (kDa)b Day 1 Day 3 Day 7 Day 14 SignalPd
AN0933
GH16
Extracellular cell wall glucanase
42
18
35
11
7
Y
AN0245
GH16
Beta-1,3(4)-endoglucanase, putative
37
0
33
15
29
Y
AN6620
GH16
Beta-1,3(4)-endoglucanase, putative
42
4
0
0
0
Y
AN6819
GH16
Endo-1,3 (4)-glucanase
32
9
7
8
7
Y
AN7950
GH17
Cell wall beta-1,3-endoglucanase
47
17
32
32
26
Y
AN4871
GH18
Protein similar to class V chitinase A
44
5
224
277
317
Nf
AN8241
GH18
Class III Chi A chitinase
97
0
5
2
0
Y
AN1502
GH20
Protein similar to N-acetylglucosaminidase
68
11
101
124
176
Y
AN0779
GH55
Putative beta-1,3-exoglucanase
84
0
19
19
15
Y
AN4825
GH55
Glucan 1,3-beta glucosidase precursor
97
0
102
108
135
Y
AN9042
GH71
Putative alpha 1,3- glucanase
69
0
51
55
60
Y
AN7657
GH72
1,3-beta-glucanosyltransferase
49
14
37
0
4
Y
AN0472
GH81
Putative beta-1,3-endoglucanase
98
0
102
99
146
Y
AN9339
 
Catalase B precursor
79
58
111
109
108
Y
AN4390
 
GPI-anchored cell wall organization protein Ecm33
41
4
7
-
-
Y
AN2385   GPI anchored beta-1,3(4)-endoglucanase, putative 65 3 - - - Y

aAccession numbers along with protein information and glycosyl hydrolase (GH) family information was obtained from Pedant [23].

bHypothetical molecular weight of the proteins.

cQuantifying changes in protein abundance between samples from different time points was done using the spectral count method, yielding a semiquantitative analysis.

dSignalP was used to predict secretion signals [23,24].

eSignalP as reported at [25].

fNot found by SignalP (N-terminal may be incorrectly annotated , a novel signal peptide may be present, or the protein is normally intracellular but was released by autolysis).