Table 1.
List of selected genes involved in biochemical pathways
| Metabolic pathway | Gene function | Gene ID | FC* | q-value |
|---|---|---|---|---|
|
Aromatic compounds |
|
|
|
|
| Tryptophan metabolism |
EC:1.14.14.1 - unspecific monooxygenase |
Na_14909 |
0.6 |
0.0241 |
| |
EC:1.4.3.2 - L-amino-acid oxidase |
Na_16251 |
0.6 |
0.0447 |
| |
EC:4.1.1.28 - aromatic-L-amino-acid decarboxylase |
Na_32067 |
2.1 |
0.0080 |
| Tyrosine metabolism |
EC:1.4.3.2 - L-amino-acid oxidase |
Na_16251 |
0.6 |
0.0447 |
| |
EC:4.1.1.28 - aromatic-L-amino-acid decarboxylase |
Na_32067 |
2.1 |
0.0080 |
| |
EC:4.1.1.25 - tyrosine decarboxylase |
Na_32067 |
2.1 |
0.0080 |
| Phenylalanine metabolism |
EC:1.4.3.2 - L-amino-acid oxidase |
Na_16251 |
0.6 |
0.0447 |
| |
EC:4.1.1.28 - aromatic-L-amino-acid decarboxylase |
Na_32067 |
2.1 |
0.0080 |
| Biosynthesis of |
EC:1.1.1.219 - dihydroflavonol 4-reductase |
Na_06408 |
2.1 |
0.0058 |
| phenylpropanoid derivatives |
EC:2.3.1.74 - chalcone synthase |
Na_02855 |
2.1 |
0.0241 |
| |
EC:1.14.11.19 - leucocyanidin oxygenase |
Na_12114 |
2.2 |
0.0019 |
|
Carbohydrate metabolism |
|
|
|
|
| Starch and sucrose |
EC:2.4.1.21 - starch synthase |
Na_41693 |
0.3 |
0.0223 |
| metabolism |
EC:2.7.1.4 - fructokinase |
Na_26865 |
0.5 |
0.0226 |
| |
EC:2.4.1.15 - alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Na_27299 |
0.5 |
0.0266 |
| |
EC:3.1.3.12 - trehalose-phosphatase |
Na_27299 |
0.5 |
0.0266 |
| Cell wall biosynthesis |
EC:2.4.1.12 - cellulose synthase (UDP-forming) |
Na_10287 |
1.9 |
0.0147 |
| |
EC:2.4.1.12 - cellulose synthase (UDP-forming) |
Na_28221 |
2.0 |
0.0260 |
|
Lipid metabolism |
|
|
|
|
| Glycerophospholipid metabolism |
EC:2.1.1.103 - phosphoethanolamine N-methyltransferase |
Na_18104 |
1.9 |
0.0299 |
| |
EC:3.1.4.46 - glycerophosphodiester phosphodiesterase |
Na_34149 |
2.4 |
0.0117 |
| Fatty acid biosynthesis | EC:2.3.1.86 - fatty-acyl-CoA synthase | Na_20395 | 1.9 | 0.0351 |
* FC: fold-change (ir-hd20 vs. WT).