Table 2.
List of selected genes involved in regulatory processes
| Gene description | FC* | q-value | Gene ID |
|---|---|---|---|
|
Gene expression |
|
|
|
| GBF S pro-rich region-interacting factor 1 |
0.3 |
0.0030 |
Na_05287 |
| WRKY transcription factor |
0.3 |
0.0120 |
Na_30800 |
| Fungal-specific transcription factor domain protein |
0.4 |
0.0140 |
Na_31163 |
| Histone acetyltransferase complex component |
0.4 |
0.0009 |
Na_15638 |
| RWP-RK domain-containing protein |
0.5 |
0.0479 |
Na_20983 |
| Chromatin remodeling complex subunit |
0.5 |
0.0395 |
Na_16219 |
| WRKY transcription factor 29 |
0.5 |
0.0420 |
Na_36997 |
| RNA polymerase sigma factor |
0.6 |
0.0222 |
Na_13263 |
| Paired amphipathic helix protein SIN3-like 2 |
0.6 |
0.0415 |
Na_13033 |
| GRAS transcription factor |
4.8 |
0.0360 |
Na_40201 |
|
Protein kinases and phosphatases |
|
|
|
| Casein kinase |
0.1 |
0.0051 |
Na_35212 |
| Ser-Thr protein phosphatase |
0.3 |
0.0158 |
Na_21633 |
| Protein phosphatase 2 C |
0.6 |
0.0436 |
Na_30444 |
| TCTR2 protein kinase |
0.4 |
0.0121 |
Na_36065 |
|
Receptor activity |
|
|
|
| Ethylene receptor 1 (ETR1) |
0.4 |
0.0144 |
Na_24848 |
| S-locus lectin protein kinase |
0.5 |
0.0147 |
Na_14354 |
| Coronatine insensitive 1 (COI1) |
0.6 |
0.0283 |
Na_04958 |
| LRR receptor-like kinase |
0.6 |
0.0388 |
Na_29192 |
|
Other regulatory activities |
|
|
|
| circadian clock-associated FKF1 | 0.3 | 0.0002 | Na_17932 |
* FC: fold-change (ir-hd20 vs. WT).