Skip to main content
. Author manuscript; available in PMC: 2013 Mar 1.
Published in final edited form as: Cancer Prev Res (Phila). 2011 Nov 1;5(3):365–373. doi: 10.1158/1940-6207.CAPR-11-0243

Table 4.

Cumulative Risk Prediction Model for COPD Based on Multiple Independent High Risk HtSNP Combination

Number of Risk Alleles Number of COPD Cases Number of Healthy Controls OR S×10 Z P-value
1. Whole Case-Control Dataset(12 risk htSNPs included)

First Level: [0,9] 99 219 1.00(reference)
Second Level: [10,12] 280 424 1.62 0.17 2.91 3.60×10-3
Third Level: [13,24] 241 250 2.73 0.18 5.61 2.07×10-8
Per-allele risk (trend test) 1.21 0.03 6.71 1.95×10-11

2. COPD Patients without Lung Cancer and Healthy Control Dataset (8 risk htSNPs included)

First Level: [0,2] 30 247 1.00(reference)
Second Level: [3,5] 108 496 1.67 0.24 2.19 2.83×10-2
Third Level: [6,16] 50 150 3.08 0.28 4.08 4.60×10-5
Per-allele risk (trend test) 1.25 0.05 4.76 1.94×10-6

3. COPD Patients with Lung Cancer and Healthy Control Dataset (4 risk htSNPs included)

First Level: [0,4] 124 324 1.00(reference)
Second Level: [5,6] 264 509 1.89 0.15 4.19 2.81×10-5
Third Level: [7,8] 44 60 2.32 0.27 3.10 1.94×10-3
Per-allele risk (trend test) 1.30 0.06 4.44 9.16×10-6