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. 2012 Aug 9;8(8):e1002864. doi: 10.1371/journal.ppat.1002864

Table 1. Microarray expression clusters showing significant overlap with genes up or down regulated upon germline ablation in P. pacificus.

DAF-16, TGF-beta and Dauer related clusters
Expression cluster sigScore.UP sigScore.DOWN
Murphy_etal_cgc5976_Class1 1.35 0
Murphy_etal_cgc5976_Class2 0 1.55
Sinha_etal_ppa_dauers_UP 4.97 0
Sinha_etal_ppa_dauers_DOWN 29.91 302.83
Roberts_etal_2010_DBL-1-DOWN 0 49.64
Roberts_etal_2010_DBL-1-UP 0 12.24

Significance scores are −log10 of the p-values obtained in a 2×2 Fisher's exact test, and have been set to zero in case of non-significant enrichment where p-value >0.05.

*

Expression clusters derived from our as yet unpublished data on pathogen response of wild-type P. pacificus to Serratia marcescens, Xenorhabdus nematophila, Staphylococcus aureus, and Bacillus thuringiensis DB27 (AS, RR, II and RJS, manuscript submitted).