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. 2012 Sep;194(17):4579–4588. doi: 10.1128/JB.00791-12

Table 1.

Cyanuric acid hydrolase/barbiturase family proteins identified in this study and identities to enzymes of known function

Clade and organisma GI no. Locus name % Identity to:
AtzD TrzD Moorella cyanuric acid hydrolase Barbiturase
1
    Clostridium asparagiforme DSM 15981 225388419 CLOSTASPAR_02155 51 57 65 45
    Moorella thermoacetica ATCC 39073 83590946 Moth_2120 58 63 100 46
    Paenibacillus sp. JDR-2 251798893 Pjdr2_4927 50 55 58 43
    Bacillus cellulosilyticus DSM 2522 317127947 Bcell_1233 37 42 41 33
    Acidovorax citrulli strain 12227 3659839 58 100 63 45
    Enterobacter cloacae strain 99 13022197 58 100 63 45
    Aminobacter aminovorans (formerly Comamonas sp. A2) 14029763 Partial sequence 58 100 63 45
    Bradyrhizobium japonicum USDA 110 27382392 blr7281 59 55 59 42
    Pseudomonas sp. ADP 32455884 100 58 58 43
    Pseudomonas nitroreducens 285310188 100 58 58 43
    Comamonas sp. A2 254972448 100 58 58 43
    Arthrobacter sp. MCMB-436 47059636 100 58 58 43
    Arthrobacter AD25 117583156 99.7 58 58 43
    Micromonas sp. strain RCC299 255079800 MICPUN_59838 45 41 42 32
    Acidithiobacillus ferrooxidans ATCC 53993 and ATCC 23270 198283056 218519570 Lferr_0922 AFE_0779 42 46 46 34
    Methylobacterium radiotolerans JCM 2831 170751160 Mrad2831_4776 51 55 51 42
    Oceanicola granulosus HTCC2516 89068460 OG2516_12979 44 44 44 37
    Agrobacterium vitis S4 222106665 Avi_5653 48 50 56 43
    Rhizobium leguminosarum bv. viciae 3841 116254793 pRL100353 48 52 54 43
    Rhizobium leguminosarum bv. trifolii WSM1325 241554234 Rleg_6452 48 52 53 44
    Methylobacterium sp. 4-46 170741972 M446_3816 46 47 47 37
    Bradyrhizobium sp. strain BTAi1 148252873 BBta_1315 47 47 52 38
    Bradyrhizobium sp. strain ORS278 146343122 BRADO6319 47 48 54 40
    Azorhizobium caulinodans ORS 571 158425516 AZC_3892 50 52 55 41
2
    Nocardioides JS614 119718489 Noca_4270 43 44 45 72
    Thermobispora bispora DSM 43833 296270184 Tbis_2213 43 49 50 77
    Streptosporangium roseum DSM 43021 271967801 Sros_6541 42 46 48 74
    Geodermatophilus obscurus DSM 43160 284988804 Gobs_0181 42 46 45 80
    Catenulispora acidiphila DSM 44928 256391076 Caci_1879 45 47 47 81
    Nakamurella multipartita DSM 44233 258655427 Namu_5328 43 45 46 84
    Nocardioides sp. strain JS614 119715741 Noca_1505 43 46 46 86
    Intrasporangium calvum DSM 43043 315588294 Intca_1068 43 47 48 80
    Janibacter sp. strain HTCC2649 84497968 JNB_17813 42 45 45 85
    Rhodococcus erythropolis JCM 3132 46395595 43 45 46 100
    Rhodococcus erythropolis SK121 229318388 RHOER0001_3381 43 45 46 99.7
    Rhodococcus erythropolis PR4 226309369 RER_58820 43 45 46 99.7
    Rhodococcus opacus B4 226362213 ROP_27990 42 46 45 92
    Rhodococcus jostii RHA1 111022263 RHA1_ro05296 45 46 45 93
    Saccharomonospora viridis DSM 43017 257056105 Svir_20970 44 46 47 85
    Azorhizobium caulinodans ORS 571 158424827 AZC_3203 49 48 52 43
    Frankia sp. EuI1c 280963003 FraEuI1c_3137 36 36 40 38
a

Organisms containing homologs are in the same order as in the phylogenetic tree in Fig. 2. Organisms in which proteins were experimentally assayed are highlighted in bold.