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. Author manuscript; available in PMC: 2013 Jul 1.
Published in final edited form as: Cancer Genet. 2012 Jul;205(7-8):377–390. doi: 10.1016/j.cancergen.2012.05.001

Table 1.

Genes significantly Up/Down-regulated greater than 2 fold in UOK268 in comparison to the HK-2 cell line.

Symbol Significantly Up-Regulated Genes in UOK268 vs HK-2
FC (Raw) FC (Log2) p-value FDR (%)
RHOT2 12.00 3.58 0.000 0.65
CPT1C 7.86 2.98 0.000 0.70
MT1G 5.48 2.45 0.003 1.93
THAP3 4.11 2.04 0.000 0.62
SLC25A44 3.75 1.91 0.011 3.58
MDH1 3.66 1.87 0.018 4.72
MT1E 3.60 1.85 0.011 3.52
TRND 3.58 1.84 0.000 0.56
SLC25A14 3.49 1.80 0.004 2.09
HSPA13 3.45 1.79 0.001 1.00
MIPEP 3.40 1.77 0.002 1.25
NKRF 3.35 1.75 0.000 0.34
CKB 3.33 1.73 0.012 3.69
UBB 3.28 1.72 0.014 4.08
DHPS 3.27 1.71 0.048 8.52
FH 3.15 1.65 0.024 5.65
P4HB 3.14 1.65 0.019 4.78
UBE2K 3.00 1.59 0.002 1.61
ALAS2 2.91 1.54 0.044 8.06
YWHAE 2.88 1.52 0.006 2.63
GPX7 2.87 1.52 0.022 5.30
SLC25A29 2.85 1.51 0.017 4.59
ACBD3 2.83 1.50 0.014 4.09
RNR1 2.82 1.50 0.001 1.00
LRRC16B 2.78 1.47 0.035 6.89
SLC40A1 2.76 1.46 0.004 2.20
PLA2G1B 2.69 1.43 0.043 7.93
CASP5 2.64 1.40 0.000 0.70
ACAA1 2.58 1.37 0.000 0.58
MTHFD1 2.53 1.34 0.006 2.54
RHOT1 2.47 1.30 0.007 2.80
ETFA 2.43 1.28 0.002 1.47
HADHA 2.39 1.26 0.002 1.47
ATPAF2 2.37 1.24 0.021 5.13
RPL5 2.30 1.20 0.024 5.65
ETFDH 2.28 1.19 0.023 5.47
SYNPR 2.26 1.18 0.007 2.90
LOC100293864 2.21 1.14 0.017 4.59
ALDH18A1 2.19 1.13 0.000 0.52
HCCS 2.18 1.12 0.010 3.39
APP 2.12 1.09 0.000 0.50
MRPS11 2.12 1.08 0.009 3.17
GRB10 2.11 1.08 0.001 0.88
MTND5 2.11 1.08 0.053 9.00
NR4A1 2.09 1.07 0.001 0.88
PCK2 2.09 1.07 0.006 2.65
BCO2 2.09 1.06 0.042 7.87
SLC25A37 2.06 1.04 0.030 6.34
MT1B 2.04 1.03 0.005 2.37
COPA 2.01 1.01 0.004 2.14
Symbol Significantly Down-Regulated Genes in UOK268 vs HK-2
FC (Raw 1/x) FC (log2) p-value FDR (%)
TIMM8A 32.02 −5.00 0.000 0.29
SLC25A25 8.68 −3.12 0.001 1.00
ATP5F1 6.02 −2.59 0.000 0.50
FXYD1 5.52 −2.46 0.000 0.06
DUOX2 4.90 −2.29 0.000 0.56
CYP2E1 4.67 −2.22 0.000 0.52
RAB5B 4.55 −2.19 0.000 0.50
ACAD9 4.10 −2.04 0.000 0.65
MRPS25 4.07 −2.03 0.005 2.44
PFN1 3.99 −2.00 0.026 5.88
GOT2 3.94 −1.98 0.000 0.65
NDUFV1 3.85 −1.94 0.018 4.60
MTFMT 3.59 −1.84 0.000 0.57
MRPL21 3.53 −1.82 0.000 0.70
ACSBG1 3.47 −1.79 0.004 2.11
TRNL2 (MTTL2) 3.39 −1.76 0.005 2.36
ROPN1B 3.38 −1.76 0.001 0.88
CASP2 3.37 −1.75 0.009 3.17
IMPDH1 3.32 −1.73 0.003 1.91
GSTK1 3.31 −1.73 0.001 0.88
LOC100129794 3.25 −1.70 0.001 0.88
ACP6 3.12 −1.64 0.001 0.75
CACNA2D2 3.11 −1.64 0.004 2.14
LDHA 3.02 −1.59 0.048 8.52
TFB1M 3.01 −1.59 0.002 1.61
CHD3 2.95 −1.56 0.001 1.11
RPS6KC1 2.87 −1.52 0.022 5.30
CYP2C18 2.86 −1.51 0.002 1.36
RAP1B 2.84 −1.50 0.002 1.25
DGUOK 2.83 −1.50 0.043 8.02
TRNL1 (MTTL1) 2.73 −1.45 0.004 2.11
ELOVL1 2.65 −1.40 0.032 6.64
UVRAG 2.60 −1.38 0.025 5.78
MYH4 2.59 −1.38 0.011 3.58
GOT1 2.57 −1.36 0.015 4.20
BCCIP 2.46 −1.30 0.025 5.82
MRPS26 2.44 −1.28 0.049 8.55
ACSL4 2.41 −1.27 0.004 1.99
COX7A2 2.35 −1.23 0.028 6.13
NAT1 2.35 −1.23 0.000 0.52
DIABLO 2.30 −1.20 0.000 0.29
TOMM20 2.29 −1.19 0.028 6.16
HNRPC 2.25 −1.17 0.001 0.88
OGDH 2.25 −1.17 0.003 1.73
SOD1 2.24 −1.16 0.040 7.63
COX7C 2.23 −1.16 0.010 3.25
ALDH6A1 2.21 −1.15 0.000 0.58
DDX27 2.17 −1.12 0.036 7.09
MPHOSPH6 2.11 −1.07 0.048 8.52
ATP5G3 2.10 −1.07 0.053 9.00
FTMT 2.06 −1.04 0.003 1.94
SLC25A46 2.05 −1.04 0.000 0.59
NOX5 2.04 −1.03 0.047 8.52
LONP1 2.01 −1.01 0.009 3.17
NDUFA9 2.01 −1.01 0.016 4.42