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. Author manuscript; available in PMC: 2013 Jul 1.
Published in final edited form as: Cancer Genet. 2012 Jul;205(7-8):377–390. doi: 10.1016/j.cancergen.2012.05.001

Table 3.

Significantly dysregulated transcripts involved in mitochondrial dysfunction identified by Ingenuity® Pathways Analysis software or known function.

Gene Location Entrez Gene Name Selection

GPX7 Cytoplasm glutathione peroxidase 7 Ingenuity Mitochondrial Dysfunction Pathway
CYB5R3 Outer Mitochondrial Membrane cytochrome b5 reductase 3 Ingenuity Mitochondrial Dysfunction Pathway
CPT1B Outer Mitochondrial Membrane carnitine palmitoyltransferase 1B (muscle) Ingenuity Mitochondrial Dysfunction Pathway
CPT1A Outer Mitochondrial Membrane carnitine palmitoyltransferase 1A (liver) Ingenuity Mitochondrial Dysfunction Pathway
CPT1C Outer Mitochondrial Membrane carnitine palmitoyltransferase 1C Ingenuity Mitochondrial Dysfunction Pathway
APP Outer Mitochondrial Membrane amyloid beta (A4) precursor protein Ingenuity Mitochondrial Dysfunction Pathway
MAOA Outer Mitochondrial Membrane monoamine oxidase A Ingenuity Mitochondrial Dysfunction Pathway
OGDH Inner Mitochondrial Membrane oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) Ingenuity Mitochondrial Dysfunction Pathway
GPX4 Mitochondrial Matrix glutathione peroxidase 4 (phospholipid hydroperoxidase) Ingenuity Mitochondrial Dysfunction Pathway
PRDX5 Mitochondrial Matrix peroxiredoxin 5 Ingenuity Mitochondrial Dysfunction Pathway
NDUFS1 Complex I NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) Ingenuity Mitochondrial Dysfunction Pathway
NDUFV1 Complex I NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa Ingenuity Mitochondrial Dysfunction Pathway
NDUFA9 Complex I NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa Ingenuity Mitochondrial Dysfunction Pathway
MTND4 Complex I NADH dehydrogenase, subunit 4 (complex I) Ingenuity Mitochondrial Dysfunction Pathway
MTND5 Complex I NADH dehydrogenase, subunit 5 (complex I) Ingenuity Mitochondrial Dysfunction Pathway
NDUFB1 Complex I NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa Ingenuity Mitochondrial Dysfunction Pathway
NDUFB5 Complex I NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa Ingenuity Mitochondrial Dysfunction Pathway
NDUFB8 Complex I NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa Ingenuity Mitochondrial Dysfunction Pathway
SDHD Complex II succinate dehydrogenase complex, subunit D, integral membrane protein Ingenuity Mitochondrial Dysfunction Pathway
UQCRC2 Complex III ubiquinol-cytochrome c reductase core protein II Ingenuity Mitochondrial Dysfunction Pathway
UQCRC1 Complex III ubiquinol-cytochrome c reductase core protein I Ingenuity Mitochondrial Dysfunction Pathway
CYB5B Complex III cytochrome b Ingenuity Mitochondrial Dysfunction Pathway
CYC1 Complex III cytochrome c-1 Ingenuity Mitochondrial Dysfunction Pathway
COX6A1 Complex IV cytochrome c oxidase subunit VIa polypeptide 1 Ingenuity Mitochondrial Dysfunction Pathway
COX7A2 Complex IV cytochrome c oxidase subunit VIIa polypeptide 2 (liver) Ingenuity Mitochondrial Dysfunction Pathway
COX7C Complex IV cytochrome c oxidase subunit VIIc Ingenuity Mitochondrial Dysfunction Pathway
MTCO3 Complex IV cytochrome c oxidase III Ingenuity Mitochondrial Dysfunction Pathway
COX6C Complex IV cytochrome c oxidase subunit VIc Ingenuity Mitochondrial Dysfunction Pathway
COX7A2L Complex IV cytochrome c oxidase subunit VIIa polypeptide 2 like Ingenuity Mitochondrial Dysfunction Pathway
ATP5F1 Complex V ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 Known Function
ATP5G3 Complex V ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 Known Function
ATP5S Complex V ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) Known Function
ATP5A1 Complex V ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle Ingenuity Mitochondrial Dysfunction Pathway
ATP5G2 Complex V ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 Known Function