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. 2012 Aug 10;3:293. doi: 10.3389/fmicb.2012.00293

Table A1.

Rarefied MPDSES values for all bacteria, Cyanobacteria, purple sulfur bacteria, and sulfate reducing bacteria.

Sample Group Taxa.labels
 Ind. Swap Phylo. Pool RelAbund
Depth Pool 1 Pool 2 Pool 3 Pool 1 Pool 1 Pool 1
YM-2010 All bacteria 0–2 0.16 5.76* −0.55 −0.68 0.1 −0.02
2–5 3.71* 1.48 1.82 2.03 3.56* 3.63*
5–10 0.45 −2.02* −1.54 0.54 0.4 0.43
10–15 −0.47 −3.17* −1.3 −0.03 −0.49 −0.52
15–20 −0.12 −2.08* −3.4* 0.13 −0.16 −0.14
Cyanobacteria 0–2 −2.11* −0.01 −2.07
2–5 −1 −0.45 −0.63
5–10 −0.312 −0.64 0.24
10–15 −0.86 0.79 −0.53
15–20 −0.429 0.89 0.21
Purple sulfur bacteria 0–2 −1.66 −0.82 −1.63
2–5 −1.13 −0.17 −0.4
5–10 0.18 −0.32 1.1
10–15 −0.96 −1.22 −0.53
15–20 −1.26 −1.11 −1.22
Sulfate reducing bacteria 0–2 NA NA NA
2–5 −2.71 −1.25 −0.32
5–10 −3.78 −2.53 −1.6
10–15 −1.88 −0.54 0.27
15–20 −2.5 −0.16 −0.29
OM-2010 All bacteria 0–2 2.61* 2.81* 3.99* 1.41 2.6* 2.61*
2–5 −2.87* −5.58* −2.17 −1.41 −2.72* −2.77*
5–10 −4.42* −4.86* −4.12* −2.29* −4.31* −4.39*
10–15 −4.08* −5.44* −3.73* −2.13* −4.09* −4.1*
15–20 NA NA NA NA NA NA
Cyanobacteria 0–2 −1.18 −0.14 −2.13
2–5 0.74 −1.18 0.54
5–10 0.80 0.33 0.46
10–15 NA NA NA
15–20 NA NA NA
Purple sulfur bacteria 0–2 −0.09 1.83 −0.75
2–5 −0.95 2.1 0.19
5–10 −0.75 1.97 −0.99
10–15 −0.20 1.13 −0.19
15–20 −0.19 1.02 0.12
Sulfate reducing bacteria 0–2 NA NA NA
2–5 −1.66 −0.76 0.04
5–10 0.29 0.54 0.32
10–15 0.69 0.82 0.94
15–20 NA NA NA
OM-2011 All bacteria 0–2 0.55 8.34* 6.49* 0.33 0.56 0.52
2–5 −5.48* −4.86* −1.69 −2.61* −5.62* −5.5*
5–10 −6.32* −5.36* −2.03 −2.98* −6.46* −6.35*
10–15 −8.56* −9.28* −7.24* −4.04* −8.65* −8.61*
15–20 −7.84 −7.29* −5.14* −3.84* −7.92* −7.92*
Cyanobacteria 0–2 −1.211 1.22 −1.5
2–5 −1.06 −0.99 −0.96
5–10 −0.156 −0.49 −0.65
10–15 −0.974 −1.23 −0.79
15–20 −1.266 1.03 −0.46
Purple sulfur bacteria 0–2 −0.48 0.54 0.02
2–5 −0.39 −0.69 −1.09
5–10 −0.16 −0.16 −0.6
10–15 −0.02 0.91 −0.1
15–20 −0.19 −0.95 −1.45
Sulfate reducing bacteria 0–2 −0.08 −0.51 −1.02
2–5 0.54 −0.24 0.12
5–10 0.70 0.61 0.56
10–15 1.11 −0.07 1.22
15–20 0.94 0.27 0.97

Values are presented for three species pools, and four null models, including abundance-weighted randomizations (see text for details). *Indicates significant (p < 0.05) phylogenetic clustering (negative values) or overdispersion (positive values) based on rank test.