Table 2.
Characteristics of CTs identified in Hirosawanoike Pond
| CT | No. of clones | No. of spacersa |
No. of unique spacers with significant hitsc |
||||
|---|---|---|---|---|---|---|---|
| Total | Sharedb | Ma-LMM01 | PMA1 | pMA1 | pMA2 | ||
| CT1 | 8 | 16 | – | 4(1) | – | 1 | |
| CT2 | 15 | 13 | 10(4–13)A | – | – | – | – |
| CT3 | 1 | 12 | – | – | – | – | |
| CT4 | 10 | 27 | 1(1)B | – | – | – | – |
| CT5 | 20 | 32 | – | – | 5 | – | |
| CT6 | 1 | 5 | 1 | – | – | – | |
| CT7 | 2 | 4 | – | – | – | – | |
| CT8 | 2 | 10 | – | – | – | – | |
| CT9 | 1 | 6 | – | – | – | 1 | |
| CT10 | 1 | 6 | – | 1 | – | – | |
| CT11 | 1 | 8 | – | – | – | – | |
| CT12 | 1 | 21 | 6(1–3, 6–8)C | – | – | – | – |
| CT13 | 1 | 15 | – | – | – | – | |
| CT14 | 1 | 7 | – | – | – | – | |
| CT15 | 1 | 28 | 3 | – | – | – | |
| CT16 | 1 | 11 | – | – | – | – | |
| CT17 | 1 | 13 | 1(1)B | – | – | – | – |
| CT18 | 1 | 13 | – | – | – | – | |
| CT19 | 3 | 17 | 1 | – | – | – | |
| CT20 | 1 | 17 | – | – | – | – | |
| CT21 | 1 | 16 | 6(1–3, 4–6)C, 10(7–16)A | – | – | – | – |
| CT22 | 6 | 4 | – | – | – | – | |
| CT23 | 6 | 11 | – | – | – | – | |
| CT24 | 3 | 9 | – | – | – | – | |
a
Number of spacers in CT contigs.
b
Spacers shared between CTs are indicated as x(y-z)N. x is the total number of shared spacers, y-z is the position of shared spacers (sequentially numbered from the leader-end spacer), and N denotes a pair of strains sharing the spacers.
c
Dashes indicate that no hit was found for the spacers. The number with 100% match is shown in parentheses.