Table 1.
Line no. | Strain | Descriptionb | Generation time (min ± SEM) |
---|---|---|---|
1 | W3110 | lacL8 lacIq | 225 ± 7 (18) |
2 | CP2 | ΔpatA | 220 ± 11 (6) |
3 | CP6 | ΔgabT | 221 ± 14 (4) |
4 | CP14 | ΔpuuE::cat | 183 ± 10 (3) |
5 | CP36 | ΔgabT ΔpuuE::cat | 305 ± 8 (3) |
6 | BLS71 | ΔpatA Δ(ydcSTUV-patD)::kan | 240 ± 14 (9) |
7 | BLS73 | Δ(ydcSTUV-patD)::kan | 228 ± 7 (24) |
8 | BLS74 | ΔpatA ΔpatD::cat | 227 ± 8 (9) |
9 | BLS75 | ΔpatD::cat | 241 ± 13 (10) |
10 | BLS77 | ΔpuuR::cat | NG, S |
11 | BLS79 | ΔpuuP::cat | NG |
12 | BLS80 | ΔpuuA::cat | NG |
13 | BLS81 | ΔpuuA | 348 ± 9 (6) |
14 | BLS82 | ΔpatA ΔpatD | 210 ± 9 (9) |
15 | BLS83 | ΔpatD | 241 ± 9 (12) |
16 | BLS84 | ΔpuuR | 121 ± 6 (12) |
17 | BLS85 | ΔpuuP | NG |
18 | BLS88 | ΔpatA ΔpuuA | NG |
19 | BLS89 | ΔpuuC::cat | 305 ± 15 (8) |
20 | BLS90 | ΔpuuC | 315 ± 12 (10) |
21 | BLS93 | ΔpuuC ΔpatD | VSG |
22 | BLS96 | ΔpuuB::cat | 320 ± 10 (6) |
23 | BLS97 | ΔpuuB | 367 ± 18 (13) |
24 | BLS98 | ΔpuuB patA::kan | NG |
25 | BLS99 | ΔpuuC Δ(ydcSTUV-patD)::kan | VSG |
26 | BLS100 | ΔpuuC ΔpatD::cat | VSG |
27 | BLS102 | ΔgabD::cat ΔpatD | 235 ± 10 (3) |
28 | BLS103 | ΔpuuC ΔpatD ΔgabD::cat | NG |
29 | BLS104 | ΔydcSTUV::cat | 234 ± 7 (6) |
30 | BLS105 | ΔydcSTUV | 225 ± 9 (6) |
31 | BLS106 | ΔpuuC ΔgabD::cat | 443 ± 24 (3) |
32 | BLS108 | ΔcsiD ΔpuuA | 344 ± 16 (3) |
33 | BLS109 | ΔpuuA ΔpatD | 507 ± 33 (3) |
34 | BLS110 | ΔpatA ΔpuuC | NG |
35 | PAJ2 | ΔpuuD | NG |
36 | SR4 | ΔgabD::cat | 184 ± 23 (4) |
NG, no growth; S, suppressors accumulate frequently on plates; VSG, very slow growth (10% increase per day) for several days, before a growth burst, which is assumed to be from accumulation of suppressors.
Deletions are assumed to be polar for genes with an antibiotic resistance gene indicated. In-frame deletions are assumed to be nonpolar, and there is no associated antibiotic resistance gene.