Table 3.
Gene | Gene annotationa | Deletion length (bp) | Operon positionb | Predicted locationc |
---|---|---|---|---|
PF0073 | Beta-glucosidase (CelB) | 774 of 1,419 (3′ end) | Cyt | |
PF1249d | ABC transporter | Complete | 1 of 2 | Cyt |
PF1250 | Hypothetical protein | Complete | 2 of 2 | Exc |
PF1251 | <Alpha-galactosidase, NEW3 domain> | Complete | 1 of 2 | Cyt |
PF1252 | Hypothetical protein | Complete | 2 of 2 | Mem |
PF1253 | [Aromatic aminotransferase II (56)] | Complete | Cyt | |
PF1254 | Sodium-dependent transporter | 904 of 1,737 (5′ end) | 1 of 2 | Mem |
Annotations are NCBI gene names (no brackets) and literature cited (square brackets), except for hypothetical genes, for which the best InterPro (angle brackets) match is given if available.
Operon predictions are from reference 55 based on the NCBI reference sequence.
Predicted cellular location; for an explanation, see footnote d of Table 2.
Adjacent to transposase (PF1248, ISPfu3) in both COM1 and reference sequences.